DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and LpR2

DIOPT Version :10

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_001097928.1 Gene:LpR2 / 43105 FlyBaseID:FBgn0051092 Length:1064 Species:Drosophila melanogaster


Alignment Length:844 Identity:253/844 - (29%)
Similarity:367/844 - (43%) Gaps:205/844 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KMTASRRGFNLTSQTRAHPSSGGSTSSRYGN---------CQRTHLIINGRHVAISLLLLVGLCG 76
            ::.||..|..|.......|::..|.|...|:         ....:.::||     :.|..:.:.|
  Fly   118 RLKASTLGPTLDQLKHLAPAAANSISPGTGSGMGIGMGHFGSSINSVLNG-----NPLKFLNVSG 177

  Fly    77 --GTAAGTPGSADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDEL--DCDY--RLCRPPHWF 135
              ||...........||..||||..|.||....:|||..||.|.|||.  :|.:  ..|.... |
  Fly   178 KIGTPLDISLGLSNYCDEKQFQCSTGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQ-F 241

  Fly   136 PCAQPHGACLAAELMCNGIDNCPGGEDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQ-DRTCIP 199
            .|.  :|.|:....:|:..::|..|.||           ..:..|..:||..||.|:. :..|||
  Fly   242 RCG--NGKCIPRRWVCDRENDCADGSDE-----------STSQCRSHTCSPEEFACKSGEGECIP 293

  Fly   200 IDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERGC-- 262
            :.:|||...||.|.||| |.|.:   ||..:...|.||||::.: :.||..|||||||||:.|  
  Fly   294 LSWMCDQNKDCRDGSDE-AQCNR---TCRSDEFTCGNGRCIQNR-FKCDDDDDCGDGSDEKNCGE 353

  Fly   263 -------------------------------------------LNLCEPQKGKFLCRNRETCLTL 284
                                                       ||.|  |.|:|.|.:|.|||..
  Fly   354 KAKCGSNFFACKSGPCIPNQWVCDGDSDCRNGEDEMQNCTVSLLNFC--QAGEFQCSDRITCLHK 416

  Fly   285 SEVCDGHSDCSDGSDETD-------------------------LCHSKPDC----DAKKCALGA- 319
            |.||||.:||.||.||:.                         .|:.|.||    |...|.:.| 
  Fly   417 SWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDISAT 481

  Fly   320 ---------------------------------------KCHMMPAS---------------GAE 330
                                                   ||.:...|               |..
  Fly   482 PRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYR 546

  Fly   331 CFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYL-LDKDNRTCRAVVYGS 394
            |.|..|::|...:..|.|:||| |...:|||.|.|..|.::|.|:|||: |.|::..|:|     
  Fly   547 CECHDGYKLGADQHTCVDIDEC-ETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----- 605

  Fly   395 KEQQPLLLYTTQMTIMGMHLREDNVRNHVYQVAGNLSK---VIGVAYDGSHIYWTNIQNEAESIV 456
            .|....||...:..|..:.|....:.:.|     |.:|   .:...:....|:|:::  ..:||.
  Fly   606 SEGHASLLLARRHDIRKIALDRPEMTSIV-----NSTKAATALDFVFRTGMIFWSDV--ATQSIY 663

  Fly   457 KANGD-GSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPR 520
            ||..| |::..::||......:.|||||:..::||:|.....|.:.:.:|....|||...:..||
  Fly   664 KAPIDEGNDRTVVLTKSSVTSDGLAVDWIYNHVYFTDTHKCTIELTNFEGSMGKVLVKDSLDIPR 728

  Fly   521 SLAVWPQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSV 585
            |:|:.|.:|.|:|:|||..|.|.||.|||:....|::.:::|||||.||:.|:|:||||.||.::
  Fly   729 SIALDPIEGWMYWSDWGASPRIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTI 793

  Fly   586 QTVRPDGTGRRTVL--DGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTI-- 646
            .:...||:.|..||  ...|:||:.:..|||.:||:||..::|...:||:|.|...:.....:  
  Fly   794 SSSNYDGSQRHQVLYSGEYLRHPFSITTFEDYVYWTDWDKQAVFKANKFNGMDVEPVTATHMLEH 858

  Fly   647 -YAVHIYHPAKQPNSPHGCE--NATCSHLCLLA------EPEIGGHSCACPDGMRLAPDHRRCM 701
             ..||:|||.:||:..:.|:  |..||||||.|      .|.|   |||||.|::|.||...|:
  Fly   859 PMVVHVYHPYRQPDGVNHCQSVNGHCSHLCLPAPRINERSPRI---SCACPTGLKLMPDGLMCV 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060 18/35 (51%)
LDLa 131..166 CDD:238060 9/34 (26%)
LDLa 184..216 CDD:238060 15/32 (47%)
LDLa 227..262 CDD:238060 17/34 (50%)
LDLa 271..302 CDD:238060 18/30 (60%)
FXa_inhibition 352..387 CDD:464251 15/35 (43%)
Ldl_recept_b 442..483 CDD:459654 13/41 (32%)
LY 466..508 CDD:214531 12/41 (29%)
Ldl_recept_b 529..569 CDD:459654 19/39 (49%)
LY 553..595 CDD:214531 18/41 (44%)
LY 596..637 CDD:214531 16/42 (38%)
FXa_inhibition 669..700 CDD:464251 18/36 (50%)
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060
LDLa 1157..1189 CDD:197566
LDLa 1198..1232 CDD:238060
LDLa 1243..1279 CDD:238060
LDLa 1283..1318 CDD:238060
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:464251
EGF_CA 1418..1452 CDD:214542
LpR2NP_001097928.1 LDLa 193..224 CDD:197566 16/30 (53%)
LDLa 235..267 CDD:197566 8/34 (24%)
LDLa 277..313 CDD:238060 18/36 (50%)
LDLa 356..388 CDD:197566 0/31 (0%)
LDLa 400..432 CDD:197566 18/33 (55%)
LDLa 442..476 CDD:238060 5/33 (15%)
LDLa 484..517 CDD:197566 0/32 (0%)
FXa_inhibition 527..562 CDD:464251 6/34 (18%)
EGF_CA 564..594 CDD:214542 15/30 (50%)
LY 675..715 CDD:214531 12/39 (31%)
LY 717..760 CDD:214531 21/42 (50%)
LY 763..803 CDD:214531 18/39 (46%)
Ldl_recept_b 782..828 CDD:459654 18/45 (40%)
Ldl_recept_b 824..866 CDD:459654 12/41 (29%)
FXa_inhibition 877..918 CDD:464251 20/43 (47%)
Blue background indicates that the domain is not in the aligned region.

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