DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and LRP3

DIOPT Version :10

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_005259002.1 Gene:LRP3 / 4037 HGNCID:6695 Length:785 Species:Homo sapiens


Alignment Length:356 Identity:98/356 - (27%)
Similarity:120/356 - (33%) Gaps:105/356 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1032 EFRCHSGECLTMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGE--QCVDKERRC 1094
            ||||.:|:||....:||...:|.|.|||.||.......|..||....|.|....  :|:..||||
Human   170 EFRCDNGKCLPGPWQCNTVDECGDGSDEGNCSAPASEPPGSLCPGGTFPCSGARSTRCLPVERRC 234

  Fly  1095 DNRKDCHDHSDEQHCEKFDKSKK--------CHVHQHGCDNGKCVDSSLVCD------------- 1138
            |..:||.|.|||..|......::        ......|...|   .|.|.|.             
Human   235 DGLQDCGDGSDEAGCPDLACGRRLGSFYGSFASPDLFGAARG---PSDLHCTWLVDTQDSRRVLL 296

  Fly  1139 ------GTND-------CGDNSDELLCEATSRC--EPGMFQCGSGS------------------- 1169
                  |.:|       .|:..|.||...:.|.  .|...:...|.                   
Human   297 QLELRLGYDDYVQVYEGLGERGDRLLQTLSYRSNHRPVSLEAAQGRLTVAYHARARSAGHGFNAT 361

  Fly  1170 ------CIAGSWECDGRIDCSDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSD 1228
                  |:.....|....| |||....|    :.|..:.||            |||...|....|
Human   362 YQVKGYCLPWEQPCGSSSD-SDGGSLGD----QGCFSEPQR------------CDGWWHCASGRD 409

  Fly  1229 ELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSG 1293
            |..|.        :|..|||.|.....:|.....|||....||.|.||.:|        |.|:.|
Human   410 EQGCP--------ACPPDQYPCEGGSGLCYTPADRCNNQKSCPDGADEKNC--------FSCQPG 458

  Fly  1294 ------RECIRREFRCDGQKDCGDGSDELSC 1318
                  ..||...:|||||:||.|||||..|
Human   459 TFHCGTNLCIFETWRCDGQEDCQDGSDEHGC 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060
LDLa 227..262 CDD:238060
LDLa 271..302 CDD:238060
FXa_inhibition 352..387 CDD:464251
Ldl_recept_b 442..483 CDD:459654
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:459654
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:464251
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060 14/29 (48%)
LDLa 1074..1109 CDD:238060 15/36 (42%)
LDLa 1118..1152 CDD:238060 10/59 (17%)
LDLa 1157..1189 CDD:197566 9/58 (16%)
LDLa 1198..1232 CDD:238060 9/33 (27%)
LDLa 1243..1279 CDD:238060 14/35 (40%)
LDLa 1283..1318 CDD:238060 17/40 (43%)
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:464251
EGF_CA 1418..1452 CDD:214542
LRP3XP_005259002.1 CUB 43..156 CDD:238001
LDLa 166..200 CDD:238060 14/29 (48%)
LDLa 212..249 CDD:238060 15/36 (42%)
CUB 254..364 CDD:238001 14/112 (13%)
LDLa 416..452 CDD:238060 14/35 (40%)
LDLa 455..489 CDD:238060 16/33 (48%)
PHA03247 <527..772 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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