DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and CG6553

DIOPT Version :10

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_610911.1 Gene:CG6553 / 36537 FlyBaseID:FBgn0033880 Length:319 Species:Drosophila melanogaster


Alignment Length:156 Identity:60/156 - (38%)
Similarity:77/156 - (49%) Gaps:35/156 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 CPGGEDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDE-VAGC 220
            |.|.::..:|..|.|  .||                    ||.:|.:|||..:|.|.||| ||.|
  Fly    23 CLGSQNATSCGHRCG--GGD--------------------CIQLDQLCDGSANCLDGSDETVAMC 65

  Fly   221 KQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERGCLNLCEPQKGKFLCRNRE------ 279
            :  ::.|||....|:.|.|:.... |||||.||.|||||:|.  ||..|..:..|.|.|      
  Fly    66 E--KVWCPGYAFRCSYGACIASTA-VCDGVQDCVDGSDEQGW--LCRAQMQQANCDNWEMYCSSG 125

  Fly   280 TCLTLSEVCDGHSDCSDGSDETD-LC 304
            .|:|.|::|||..||.||.||.: ||
  Fly   126 QCMTYSKLCDGIRDCRDGDDELESLC 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060 2/8 (25%)
LDLa 184..216 CDD:238060 9/31 (29%)
LDLa 227..262 CDD:238060 18/34 (53%)
LDLa 271..302 CDD:238060 15/36 (42%)
FXa_inhibition 352..387 CDD:464251
Ldl_recept_b 442..483 CDD:459654
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:459654
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:464251
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060
LDLa 1157..1189 CDD:197566
LDLa 1198..1232 CDD:238060
LDLa 1243..1279 CDD:238060
LDLa 1283..1318 CDD:238060
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:464251
EGF_CA 1418..1452 CDD:214542
CG6553NP_610911.1 LDLa 34..60 CDD:197566 13/47 (28%)
LDLa 70..101 CDD:197566 16/31 (52%)
LDLa 115..146 CDD:197566 13/30 (43%)
Blue background indicates that the domain is not in the aligned region.

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