| Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001128355.1 | Gene: | Lrp12 / 314941 | RGDID: | 1304943 | Length: | 858 | Species: | Rattus norvegicus |
| Alignment Length: | 478 | Identity: | 113/478 - (23%) |
|---|---|---|---|
| Similarity: | 159/478 - (33%) | Gaps: | 187/478 - (39%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 994 GCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDCEF--RCHSGECLTMNHR---CNGRRDC 1053
Fly 1054 VDNSDEMNCD-----EEHRR-----KPKVLCSPNQ--FACHSGEQCVDKERRCDNRKDCH----- 1101
Fly 1102 DHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELLC---------EATSR 1157
Fly 1158 CEPGMFQCGSG-----SCIAGSWECDGRIDCSDGSDEHDKCVHRSC------------------- 1198
Fly 1199 -PP-----------DMQRCLL-------------------------------------------- 1207
Fly 1208 ----GQ--------------------------------------CLDRSLVCDGHNDCGDKSDEL 1230
Fly 1231 NCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGRE 1295
Fly 1296 CIRREFRCDGQKDCGDGSDELSC 1318 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
| LDLa | 131..166 | CDD:238060 | |||
| LDLa | 184..216 | CDD:238060 | |||
| LDLa | 227..262 | CDD:238060 | |||
| LDLa | 271..302 | CDD:238060 | |||
| FXa_inhibition | 352..387 | CDD:291342 | |||
| Ldl_recept_b | 442..482 | CDD:278487 | |||
| LY | 466..508 | CDD:214531 | |||
| Ldl_recept_b | 529..569 | CDD:278487 | |||
| LY | 553..595 | CDD:214531 | |||
| LY | 596..637 | CDD:214531 | |||
| FXa_inhibition | 669..700 | CDD:291342 | |||
| LY | 774..815 | CDD:214531 | |||
| LDLa | 1032..1062 | CDD:238060 | 8/34 (24%) | ||
| LDLa | 1074..1109 | CDD:238060 | 7/41 (17%) | ||
| LDLa | 1118..1152 | CDD:238060 | 14/33 (42%) | ||
| LDLa | 1157..1189 | CDD:197566 | 14/36 (39%) | ||
| LDLa | 1198..1232 | CDD:238060 | 14/150 (9%) | ||
| LDLa | 1243..1279 | CDD:238060 | 13/35 (37%) | ||
| LDLa | 1283..1318 | CDD:238060 | 16/34 (47%) | ||
| LDLa | 1340..1371 | CDD:197566 | |||
| FXa_inhibition | 1388..1416 | CDD:291342 | |||
| EGF_CA | 1418..1452 | CDD:214542 | |||
| Lrp12 | NP_001128355.1 | CUB | 47..158 | CDD:238001 | 23/123 (19%) |
| LDLa | 166..200 | CDD:238060 | 15/42 (36%) | ||
| LDLa | 215..254 | CDD:238060 | 17/39 (44%) | ||
| CUB | 267..371 | CDD:238001 | 6/103 (6%) | ||
| LDLa | 375..410 | CDD:238060 | 7/34 (21%) | ||
| LDLa | 413..448 | CDD:238060 | 13/35 (37%) | ||
| LDLa | 451..485 | CDD:238060 | 16/34 (47%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.900 | |||||