Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017448147.1 | Gene: | Lrp6 / 312781 | RGDID: | 1304749 | Length: | 1613 | Species: | Rattus norvegicus |
Alignment Length: | 1111 | Identity: | 313/1111 - (28%) |
---|---|---|---|
Similarity: | 467/1111 - (42%) | Gaps: | 195/1111 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 352 CKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLRE 416
Fly 417 DNVRNHVYQVAGNLSKVIGVAYD--GSHIYWTNIQNEAESIVKANGDGSNAEILLTSGLDAPEDL 479
Fly 480 AVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDWGEKPMIGR 544
Fly 545 ASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKHPYGL 609
Fly 610 AIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTIYAVH--------IYHPAKQPN-SPHGCE 665
Fly 666 NATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLLEIEHTAFGR--- 727
Fly 728 -HQVSKSYTLPC----LINEMVYNRINGSLIIADNDQRLILEFQPESHESNVLVRSNLGNVSA-- 785
Fly 786 ----LAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPG-QEVPIGLTVMPAEGYLYVVLKA 845
Fly 846 KRHSHIDKIPLSGKGEQVHVFEDDLG-DDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQIF 909
Fly 910 R-GKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGI 973
Fly 974 PLAASSPVGQ-ESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDC---EFR 1034
Fly 1035 CHSG--ECLTMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQCVDKERRCDNR 1097
Fly 1098 KDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELLCEATSRCEP-- 1160
Fly 1161 --------GM-----------FQC---------GSGSCIAGSWECDGRIDCSDGSDEHDKCVHRS 1197
Fly 1198 CPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQY-------------- 1248
Fly 1249 --------QCTSNLKICLPSTVRCNG------------TTECPRGEDEADCGDVC-SIYEFKCRS 1292
Fly 1293 GRECIRREFRCDGQKDC-------GDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDCQDG 1350
Fly 1351 ECVDLS 1356 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
LDLa | 131..166 | CDD:238060 | |||
LDLa | 184..216 | CDD:238060 | |||
LDLa | 227..262 | CDD:238060 | |||
LDLa | 271..302 | CDD:238060 | |||
FXa_inhibition | 352..387 | CDD:291342 | 12/34 (35%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 16/39 (41%) | ||
LY | 466..508 | CDD:214531 | 18/41 (44%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 19/39 (49%) | ||
LY | 553..595 | CDD:214531 | 10/41 (24%) | ||
LY | 596..637 | CDD:214531 | 15/40 (38%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 16/30 (53%) | ||
LY | 774..815 | CDD:214531 | 14/46 (30%) | ||
LDLa | 1032..1062 | CDD:238060 | 12/31 (39%) | ||
LDLa | 1074..1109 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1118..1152 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1157..1189 | CDD:197566 | 8/61 (13%) | ||
LDLa | 1198..1232 | CDD:238060 | 9/33 (27%) | ||
LDLa | 1243..1279 | CDD:238060 | 10/69 (14%) | ||
LDLa | 1283..1318 | CDD:238060 | 8/42 (19%) | ||
LDLa | 1340..1371 | CDD:197566 | 5/17 (29%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | |||
EGF_CA | 1418..1452 | CDD:214542 | |||
Lrp6 | XP_017448147.1 | NHL | 55..272 | CDD:302697 | |
NHL repeat | 55..93 | CDD:271320 | |||
LY | 89..127 | CDD:214531 | |||
NHL repeat | 97..132 | CDD:271320 | |||
NHL repeat | 140..176 | CDD:271320 | |||
Ldl_recept_b | 150..190 | CDD:278487 | |||
LY | 175..216 | CDD:214531 | |||
NHL repeat | 181..217 | CDD:271320 | |||
NHL repeat | 226..253 | CDD:271320 | |||
FXa_inhibition | 286..323 | CDD:291342 | |||
LY | 353..393 | CDD:214531 | |||
LY | 397..437 | CDD:214531 | |||
LY | 438..481 | CDD:214531 | |||
LY | 483..524 | CDD:214531 | |||
LY | 525..558 | CDD:214531 | |||
FXa_inhibition | 592..627 | CDD:291342 | 12/34 (35%) | ||
LY | 656..694 | CDD:214531 | 8/39 (21%) | ||
LY | 697..739 | CDD:214531 | 18/41 (44%) | ||
LY | 740..783 | CDD:214531 | 24/42 (57%) | ||
LY | 783..825 | CDD:214531 | 10/42 (24%) | ||
LY | 827..866 | CDD:214531 | 15/46 (33%) | ||
FXa_inhibition | 893..929 | CDD:291342 | 17/37 (46%) | ||
LY | 958..998 | CDD:214531 | 8/39 (21%) | ||
LY | 1001..1048 | CDD:214531 | 14/46 (30%) | ||
Ldl_recept_b | 1069..1110 | CDD:278487 | 11/43 (26%) | ||
LY | 1094..1136 | CDD:214531 | 14/44 (32%) | ||
FXa_inhibition | 1207..1243 | CDD:291342 | 15/36 (42%) | ||
LDLa | 1249..1285 | CDD:238060 | 13/35 (37%) | ||
LDLa | 1288..1322 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1326..1360 | CDD:238060 | 16/33 (48%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |