Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008763615.1 | Gene: | Lrp1 / 299858 | RGDID: | 1307535 | Length: | 4562 | Species: | Rattus norvegicus |
Alignment Length: | 2061 | Identity: | 542/2061 - (26%) |
---|---|---|---|
Similarity: | 797/2061 - (38%) | Gaps: | 659/2061 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MCQAEHQVHPS----EQRIRVES---PKMTASRR-------------GFNLTSQTRAHPSSGGST 45
Fly 46 SSRYGN---CQRTHLIINGRHVAISLLLLVGL--CGGTAAGTPGSADTRCDAGQFQCRDGGCILQ 105
Fly 106 AKMCDGRGDCKDSSDELDCD-------YR---------------LCRPPHW-------------- 134
Fly 135 ---------------FPCAQPHGACLAAELMCNGIDNCPGGEDELNCPVRPGFRFGDTAHRMRSC 184
Fly 185 SKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCK-----QAEITCPGEGHLCANGRCLRRKQ 244
Fly 245 WVCDGVDDCGDGSDE---RGCL--NLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDET--- 301
Fly 302 ----------------------------DLCHSKPD----------------------CDAKKCA 316
Fly 317 LGA----------------KCHMMPA----------------SGAECFCPKGFRLAKFEDKCEDV 349
Fly 350 DECKEQDDLCSQGCENTSGGYRCVCDAGYL-LDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMH 413
Fly 414 LREDNVRNHVYQ-VAGNLSKVIGVAYD--GSHIYWTNIQNEAESIVKANGDGSNAEILLTSGLDA 475
Fly 476 PEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDWGEKP 540
Fly 541 MIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGMLKH 605
Fly 606 PYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTIYA---VHIYHPAKQPNSP-HGCE- 665
Fly 666 -NATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRCMLMEKRQRLFIGLGQVLLEIEHTAFGRHQ 729
Fly 730 VSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESHESNVLVRSNLGNVSALAFDHLSRN 794
Fly 795 LYW-ADTERAVIEVLSLQTRHRALIRFFPGQEVPIGLTVMPAEGYLYVVLKAKRHSHIDKIPLSG 858
Fly 859 KGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNYRVPHSQIFRGKLRRPYSLAMVH 923
Fly 924 HDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPLAASSPVGQESHPC 988
Fly 989 QQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVE-----------ALDCEFRC-HSGECL 1041
Fly 1042 TMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCSPNQFACHSGEQC------------------- 1087
Fly 1088 ----------VDKER------------RCDNRKDCHDHSDE--QHCEKFDKSKKCHVHQHGCDNG 1128
Fly 1129 KCVDSSLVCDGTNDCGDNSDELLCEATSR-CEPGMFQCGSGSCIAGSWECDGRIDCSDGSDEHDK 1192
Fly 1193 CVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKIC 1257
Fly 1258 LPSTVRCNGTTECPRGEDEADCGDVCSIYE------FKCRSGRECIRREFRCDGQKDCGDGSDEL 1316
Fly 1317 SCELEKGHHNQSQIQPWSTSSRSCRPHL-FDCQDGECVDLSRVCNNFPDCTNGHDE-----GPKC 1375
Fly 1376 ATACRSASGRQVC--QHKCRATPAGAVCSCFDGYRLDADQKSCLDIDECQEQQPCAQLCENTLGG 1438
Fly 1439 YQCQCHADFMLRQDRVSCKSLQSGATLLF-SSFNEVRNL--------SEQPVMLNVAWSANDS-R 1493
Fly 1494 ITGFDLAMHRQMGYFSAEDEGIV------------------YQIDLQTKVIVRALGLPAPTKLSV 1540
Fly 1541 DWVTGNVY-VLSGAQEIQACSFVGRMCGRIVH--VKSPRHVKHLAVDGYHARIFYIVIRTEGYGQ 1602
Fly 1603 TSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLERISYRLK-TGPMRRPE 1666
Fly 1667 IMLQKSNALMHPSGLSVYENNAFIVNLGSVEAVQCALYGSRICHKISINVL----NAQDIVVAGR 1727
Fly 1728 SRQPQKASHPCAHAHCHGLCLQADYGYECMCGNRLVAEGERCPHGS 1773 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | 16/33 (48%) |
LDLa | 131..166 | CDD:238060 | 14/63 (22%) | ||
LDLa | 184..216 | CDD:238060 | 15/31 (48%) | ||
LDLa | 227..262 | CDD:238060 | 16/37 (43%) | ||
LDLa | 271..302 | CDD:238060 | 15/61 (25%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 14/35 (40%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 14/39 (36%) | ||
LY | 466..508 | CDD:214531 | 15/41 (37%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 20/39 (51%) | ||
LY | 553..595 | CDD:214531 | 16/41 (39%) | ||
LY | 596..637 | CDD:214531 | 17/40 (43%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 16/30 (53%) | ||
LY | 774..815 | CDD:214531 | 4/41 (10%) | ||
LDLa | 1032..1062 | CDD:238060 | 11/30 (37%) | ||
LDLa | 1074..1109 | CDD:238060 | 18/77 (23%) | ||
LDLa | 1118..1152 | CDD:238060 | 17/33 (52%) | ||
LDLa | 1157..1189 | CDD:197566 | 18/32 (56%) | ||
LDLa | 1198..1232 | CDD:238060 | 13/33 (39%) | ||
LDLa | 1243..1279 | CDD:238060 | 11/35 (31%) | ||
LDLa | 1283..1318 | CDD:238060 | 14/40 (35%) | ||
LDLa | 1340..1371 | CDD:197566 | 11/31 (35%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 8/29 (28%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 16/33 (48%) | ||
Lrp1 | XP_008763615.1 | LDLa | 27..60 | CDD:197566 | |
LDLa | 72..105 | CDD:197566 | |||
FXa_inhibition | 120..149 | CDD:291342 | |||
FXa_inhibition | 161..189 | CDD:291342 | |||
LY | 276..315 | CDD:214531 | |||
LY | 317..359 | CDD:214531 | |||
LY | 362..402 | CDD:214531 | |||
FXa_inhibition | 487..520 | CDD:291342 | |||
LY | 552..594 | CDD:214531 | |||
LY | 595..634 | CDD:214531 | |||
LY | 641..690 | CDD:214531 | |||
LY | <701..734 | CDD:214531 | |||
FXa_inhibition | 808..843 | CDD:291342 | |||
LDLa | 854..886 | CDD:197566 | |||
LDLa | 896..929 | CDD:238060 | |||
LDLa | 936..968 | CDD:197566 | |||
LDLa | 979..1012 | CDD:238060 | |||
LDLa | 1033..1066 | CDD:238060 | |||
LDLa | 1080..1115 | CDD:238060 | |||
LDLa | 1122..1158 | CDD:238060 | |||
LDLa | 1163..1196 | CDD:238060 | |||
FXa_inhibition | 1203..1239 | CDD:291342 | |||
LY | 1354..1394 | CDD:214531 | |||
LY | 1398..1441 | CDD:214531 | |||
LY | 1442..1486 | CDD:214531 | |||
LY | 1631..1667 | CDD:214531 | |||
LY | 1668..1711 | CDD:214531 | |||
LY | 1715..1752 | CDD:214531 | |||
LY | 1752..1793 | CDD:214531 | |||
FXa_inhibition | 1868..1904 | CDD:291342 | |||
LY | 1934..1974 | CDD:214531 | |||
LY | 1977..2017 | CDD:214531 | |||
LY | 2018..2061 | CDD:214531 | |||
LY | 2063..2105 | CDD:214531 | |||
FXa_inhibition | 2177..2212 | CDD:291342 | |||
YvrE | 2271..2481 | CDD:225921 | |||
Ldl_recept_b | 2362..2403 | CDD:278487 | |||
LY | 2388..2429 | CDD:214531 | |||
FXa_inhibition | 2500..2532 | CDD:291342 | 6/21 (29%) | ||
LDLa | 2545..2575 | CDD:238060 | 4/29 (14%) | ||
LDLa | 2584..2618 | CDD:238060 | 7/33 (21%) | ||
LDLa | 2623..2657 | CDD:238060 | 16/33 (48%) | ||
LDLa | <2684..2706 | CDD:238060 | 3/21 (14%) | ||
LDLa | 2714..2748 | CDD:238060 | 12/35 (34%) | ||
LDLa | 2752..2783 | CDD:197566 | 15/31 (48%) | ||
LDLa | 2791..2824 | CDD:197566 | 14/39 (36%) | ||
LDLa | 2835..2867 | CDD:197566 | 14/34 (41%) | ||
LDLa | 2875..2908 | CDD:197566 | 2/32 (6%) | ||
LDLa | 2925..2957 | CDD:238060 | 3/31 (10%) | ||
cEGF | 2980..3003 | CDD:289433 | 10/22 (45%) | ||
EGF_CA | 3000..>3029 | CDD:214542 | 15/29 (52%) | ||
LY | 3067..3111 | CDD:214531 | 11/43 (26%) | ||
LY | 3112..3154 | CDD:214531 | 15/41 (37%) | ||
LY | 3156..3198 | CDD:214531 | 21/41 (51%) | ||
LY | 3200..3241 | CDD:214531 | 16/40 (40%) | ||
LY | 3242..3282 | CDD:214531 | 17/39 (44%) | ||
FXa_inhibition | 3312..3348 | CDD:291342 | 18/37 (49%) | ||
LDLa | 3352..3383 | CDD:238060 | 14/209 (7%) | ||
LDLa | 3392..3426 | CDD:238060 | 10/45 (22%) | ||
LDLa | 3431..3466 | CDD:238060 | 12/34 (35%) | ||
LDLa | 3470..3503 | CDD:197566 | 7/32 (22%) | ||
LDLa | 3511..3544 | CDD:197566 | 9/32 (28%) | ||
LDLa | 3554..3588 | CDD:238060 | 17/33 (52%) | ||
LDLa | 3593..3627 | CDD:238060 | 20/34 (59%) | ||
LDLa | 3631..3665 | CDD:238060 | 13/33 (39%) | ||
LDLa | 3671..3703 | CDD:197566 | 12/39 (31%) | ||
LDLa | 3713..3749 | CDD:238060 | 13/35 (37%) | ||
LDLa | 3764..3794 | CDD:238060 | 12/29 (41%) | ||
LY | 3973..4010 | CDD:214531 | 14/36 (39%) | ||
Ldl_recept_b | 4031..4071 | CDD:278487 | 10/45 (22%) | ||
LY | 4055..4096 | CDD:214531 | 12/42 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |