DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and LRP10

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:XP_005267567.1 Gene:LRP10 / 26020 HGNCID:14553 Length:721 Species:Homo sapiens


Alignment Length:452 Identity:108/452 - (23%)
Similarity:146/452 - (32%) Gaps:156/452 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   932 GTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNG-IPL-----AASSPVGQESHPCQQ 990
            |:.|:  |.:|.:.|  :|.:.|       .|..|:..|.| :.:     .|.:|:||.      
Human    81 GSERL--TLRSPLQP--LISLCE-------APPSPLQLPGGNVTITYSYAGARAPMGQG------ 128

  Fly   991 QNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDCEFRCHSGECLTMNHRCNGRRDCVD 1055
                 ..:...:.|.|.          ..|....|::.   ||:|.:..|::...||:|...|.|
Human   129 -----FLLSYSQAPLHG----------ASADWLMCLQE---EFQCLNHRCVSAVQRCDGVDACGD 175

  Fly  1056 NSDEMNCDEE------HRRKPKVLC------------SPNQFACHSGEQCVDKERRCDNRKDCHD 1102
            .|||..|..:      .|..|.:.|            ||.    ::....|...:.|....|.||
Human   176 GSDEAGCSSDPFPGLTPRPVPSLPCNVTLEDFYGVFSSPG----YTHLASVSHPQSCHWLLDPHD 236

  Fly  1103 --------------HSDEQH----------------CEKFDKSKKCHVHQHGCDNGKCVDSSLVC 1137
                          ..|..|                ...|...|...|...   :|:.|.|....
Human   237 GRRLAVRFTALDLGFGDAVHVYDGPGPPESSRLLRSLTHFSNGKAVTVETL---SGQAVVSYHTV 298

  Fly  1138 DGTNDCGDNSDELLCEATSRCEPGMFQCGSGS-----------CIAGSWECDGRIDCSDGSDEHD 1191
            ..:|..|.|:   .......|.|....||.||           |.:.:..|||..||:||:||.|
Human   299 AWSNGRGFNA---TYHVRGYCLPWDRPCGLGSGLGAGEGLGERCYSEAQRCDGSWDCADGTDEED 360

  Fly  1192 KCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKI 1256
             |  ..|||                  ||..||      ..||..:|                 .
Human   361 -C--PGCPP------------------GHFPCG------AAGTSGAT-----------------A 381

  Fly  1257 CLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGRECIRREFRCDGQKDCGDGSDELSC 1318
            |.....|||..|.|..|.||..|.. |....|:||. .:|:...:.||||.||.|||||..|
Human   382 CYLPADRCNYQTFCADGADERRCRH-CQPGNFRCRD-EKCVYETWVCDGQPDCADGSDEWDC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060
LDLa 227..262 CDD:238060
LDLa 271..302 CDD:238060
FXa_inhibition 352..387 CDD:291342
Ldl_recept_b 442..482 CDD:278487
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:278487
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:291342
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060 12/29 (41%)
LDLa 1074..1109 CDD:238060 10/76 (13%)
LDLa 1118..1152 CDD:238060 7/33 (21%)
LDLa 1157..1189 CDD:197566 14/42 (33%)
LDLa 1198..1232 CDD:238060 7/33 (21%)
LDLa 1243..1279 CDD:238060 9/35 (26%)
LDLa 1283..1318 CDD:238060 16/34 (47%)
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:291342
EGF_CA 1418..1452 CDD:214542
LRP10XP_005267567.1 CUB 34..134 CDD:238001 15/74 (20%)
LDLa 148..182 CDD:238060 13/36 (36%)
CUB 200..310 CDD:238001 19/119 (16%)
LDLa <338..361 CDD:238060 11/23 (48%)
LDLa 407..441 CDD:238060 16/34 (47%)
PRK04654 <581..683 CDD:135173
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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