DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and M03E7.4

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_001343649.1 Gene:M03E7.4 / 187424 WormBaseID:WBGene00019756 Length:542 Species:Caenorhabditis elegans


Alignment Length:330 Identity:88/330 - (26%)
Similarity:121/330 - (36%) Gaps:120/330 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1127 NGKCVDSSLVCDG---TNDCGDNSDELLCEA--------------------------------TS 1156
            :|..::..:|.:|   .|.|  ||.:||.||                                ..
 Worm    20 SGNGIEQLMVAEGPIPQNFC--NSSDLLEEAGLIKSTLGQFLGYECSEEFYHCRWQSDGFRTYRK 82

  Fly  1157 RCEPGMFQCGSGSCIAGSWECD-------------GRIDCSDGSDEHDKCVHRSCPPDMQRCLLG 1208
            :|:||:..     .:.|:..|:             |.:.| :|:|.|       ||      |..
 Worm    83 KCKPGLVY-----DVLGTQNCNYDYNVKSCGVRSGGPVQC-NGTDFH-------CP------LSE 128

  Fly  1209 QCLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRG 1273
            ||:..|..||||.||..:.||.||..        |...::.|..: :.|:....||||..||..|
 Worm   129 QCVPMSSRCDGHYDCSMEEDEQNCPL--------CTAGEFACKVS-EQCISLDRRCNGLIECDDG 184

  Fly  1274 EDEADCGDVCSIYEFKCRSGRECIRREFRCDGQKDCGDGSDELSC---ELEKGHHNQSQIQPWST 1335
            .||.|| |||....|.|....|||..:.||||::.|..|.||:.|   |.||             
 Worm   185 TDERDC-DVCGHGLFHCGKSNECIPMDERCDGRRQCPHGEDEMLCKKPETEK------------- 235

  Fly  1336 SSRSCRPHLFDCQDGEC-VDLSRVCNNFPDCTNGHDE-------GPKCATACRSASGRQVCQHKC 1392
                    .|.||..:. :..::||:..|.|.:|.||       .||...|...:|         
 Worm   236 --------KFTCQSRDYEIPTNQVCDGMPQCPDGSDEAYCEYPGSPKSQAAISFSS--------- 283

  Fly  1393 RATPA 1397
            ..|||
 Worm   284 NLTPA 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060
LDLa 227..262 CDD:238060
LDLa 271..302 CDD:238060
FXa_inhibition 352..387 CDD:291342
Ldl_recept_b 442..482 CDD:278487
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:278487
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:291342
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060 8/27 (30%)
LDLa 1157..1189 CDD:197566 8/44 (18%)
LDLa 1198..1232 CDD:238060 14/33 (42%)
LDLa 1243..1279 CDD:238060 12/35 (34%)
LDLa 1283..1318 CDD:238060 14/34 (41%)
LDLa 1340..1371 CDD:197566 8/31 (26%)
FXa_inhibition 1388..1416 CDD:291342 3/10 (30%)
EGF_CA 1418..1452 CDD:214542
M03E7.4NP_001343649.1 LDLa 117..152 CDD:238060 18/48 (38%)
LDLa 155..190 CDD:238060 12/35 (34%)
LDLa 193..228 CDD:238060 14/34 (41%)
LDLa 233..267 CDD:238060 12/54 (22%)
PHA03247 <353..496 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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