DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and egg-1

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_498237.2 Gene:egg-1 / 175804 WormBaseID:WBGene00015083 Length:551 Species:Caenorhabditis elegans


Alignment Length:490 Identity:141/490 - (28%)
Similarity:191/490 - (38%) Gaps:126/490 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   971 NGIPLAASSPVGQESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALD----- 1030
            ||||:.:..|  |....|......|:      |..|.:  .|:.  .|..|.|.|.:..|     
 Worm   108 NGIPMTSLFP--QNVSTCSGFGFACT------GAVHMV--IPSS--KRCDGRRDCEDGSDEENCK 160

  Fly  1031 -CE--FRC---------HSGE--------CLTMNHRCNGRRDCVDNSDEMNCDEEHRRKPKVLCS 1075
             |:  |.|         ..|.        |||..|.|:...:|.|.|||..|        |..||
 Worm   161 ECQSVFSCKLRPEEESKKKGRSTVQPTLICLTAQHLCDNVENCPDGSDEAVC--------KSSCS 217

  Fly  1076 PNQFACHSGEQCVDKERRCDNRKDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGK-CVDSSLVCDG 1139
            .:||.|.....|:....:||...||.|.|||::|      .||..:.|.|  || |:.:|.||||
 Worm   218 KDQFKCPGSNACLPLSAKCDGINDCADASDEKNC------SKCQNNAHKC--GKQCIKASHVCDG 274

  Fly  1140 TNDCGDNSDELLCEATSRCE-PGMFQCGSGSCIAGSWECDGRIDCSDGSDEHD------------ 1191
            ...|.|.|||..|:. .||. .....|..|:||..:..|||:.||:||.||.|            
 Worm   275 VAQCADGSDEQQCDC-QRCSGTDKALCDDGTCIMRTQVCDGKKDCTDGMDEEDCPGSCTIESFSP 338

  Fly  1192 ----------------------------KCVHRSCPPDMQ-RCLLGQ-----CLDRSLVCDGHND 1222
                                        .|.:..|.|.:. .|...:     |:.|..||||..|
 Worm   339 KLKMVTCSDGKQYTEAEACSGSFESCDHDCPNSKCHPKLAFTCPASKEARKMCISRRKVCDGTPD 403

  Fly  1223 CGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYE 1287
            |.|.:||:|| |......|: ...|::|...   ||.|:.||:|..:|....||..| |.|....
 Worm   404 CDDGADEINC-TPIKECGIA-KNTQFKCDHK---CLDSSRRCDGVWDCEDKSDEKGC-DKCPSGT 462

  Fly  1288 FKCRSGRECIRREFRCDGQKDCGDGSDELSCELEK--GHHNQSQIQPWSTSSRSCRPHLFDCQDG 1350
            .||.:.::|:....||:|..||.||||||.|..::  |.|:.:.:         |.      :..
 Worm   463 IKCAADKKCLPAFTRCNGVADCSDGSDELKCSCQECLGVHSNTYM---------CN------ESN 512

  Fly  1351 ECVDLSRVCNNFPDCTNG-HDEGPKCATACRSASG 1384
            .|:....||:.:..|.|. :.:...||......||
 Worm   513 RCLKRDEVCSPYSMCPNATYTDKAFCAALFLKKSG 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060
LDLa 227..262 CDD:238060
LDLa 271..302 CDD:238060
FXa_inhibition 352..387 CDD:291342
Ldl_recept_b 442..482 CDD:278487
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:278487
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:291342
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060 13/48 (27%)
LDLa 1074..1109 CDD:238060 14/34 (41%)
LDLa 1118..1152 CDD:238060 16/34 (47%)
LDLa 1157..1189 CDD:197566 13/32 (41%)
LDLa 1198..1232 CDD:238060 14/39 (36%)
LDLa 1243..1279 CDD:238060 11/35 (31%)
LDLa 1283..1318 CDD:238060 15/34 (44%)
LDLa 1340..1371 CDD:197566 6/31 (19%)
FXa_inhibition 1388..1416 CDD:291342
EGF_CA 1418..1452 CDD:214542
egg-1NP_498237.2 LDLa 123..159 CDD:238060 10/45 (22%)
LDLa 216..251 CDD:238060 14/34 (41%)
LDLa 254..287 CDD:238060 16/34 (47%)
LDLa 300..327 CDD:238060 13/26 (50%)
LDLa <391..413 CDD:238060 11/21 (52%)
LDLa 425..455 CDD:238060 11/32 (34%)
LDLa 458..493 CDD:238060 15/34 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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