DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yl and F14B4.1

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_492474.2 Gene:F14B4.1 / 172750 WormBaseID:WBGene00008779 Length:722 Species:Caenorhabditis elegans


Alignment Length:634 Identity:180/634 - (28%)
Similarity:280/634 - (44%) Gaps:132/634 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 PPHWFPCAQPHGA-C----LAAELMCNG--IDNCPGGEDELNCPVRPGFRFGDTAHRMRSCSKY- 187
            ||...|..:|..: |    .||.|.|.|  :|.   ..|..|..:.|     ..:..:.:|:|| 
 Worm    53 PPPSIPILKPDASPCDLIEEAAALHCIGPLVDY---AADLTNNVLHP-----PLSDVVETCAKYN 109

  Fly   188 EFM---------CQQDRTCIP-IDFM----CDGRPDCTDKSD-----EVAGCKQAE--------- 224
            ::|         |:|.|.  | |:||    |:.:.....|.:     ||...|..:         
 Worm   110 QYMMCTQGVRPDCRQSRA--PNIEFMYETICEPKFAAIMKEEQACLLEVENDKNVKECFVNKTNT 172

  Fly   225 --------ITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERGCLNLCEPQKGKFLC----RN 277
                    ::.|.:.:.|.          |.....||....:|..|.: .|..:..||.    ||
 Worm   173 LRDETPDTVSNPTQNYECT----------VIQAYVDCLIEREETSCRD-AEKIEISFLSMLAKRN 226

  Fly   278 RETCLTLSEVCDGHSDCSDGSDETDLCHSKP------DCDAK-KCALGAKCHMMPASGAECFCPK 335
            .|:...|:               |:...|:|      :||.: .|    ||.:           .
 Worm   227 SESRCELN---------------TNAIKSRPKAQPLEECDTQGNC----KCRL-----------P 261

  Fly   336 GFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCD-AGYLLDKDNRTCRAVVYGSKEQQP 399
            |:.......||.|||||:.....|||.|.|..|.:.|.|| ..|.|..||:||..:     :|.|
 Worm   262 GYYYEAARKKCLDVDECESLSSACSQKCVNLPGTFECTCDPRTYKLATDNKTCERI-----DQSP 321

  Fly   400 LLLYTTQMTIMGMHLREDNVRNHVYQV--AGNLSK--VIGVAYDGSHIYWTNIQNEAESIVKANG 460
            :.|:...    |..:...:.....:|:  || |.|  :|.:....:.:|:.:|  .|..|.:.|.
 Worm   322 MWLFFAH----GQSVWNISTDGKSFQLQRAG-LQKTAMIDIDVKENRLYYADI--GANVIERMNI 379

  Fly   461 DGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRH-IAVCSNDGLNCAVLVTQDVHQPRSLAV 524
            :|:..:.:....:|..|.:||||:.:|:|   ::.|. |.|.|.||.....|....:..|||:.:
 Worm   380 EGTFPQAVQRFDVDGLEGIAVDWIGRNLY---SLRREDILVQSLDGRFRQPLYKNVMTLPRSITL 441

  Fly   525 WPQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVR 589
            .|.||:||.|||.....|..||||||..|.|:::.|.|||.:|:|:..::|||.||.|.::::..
 Worm   442 HPAKGIMFVTDWSANAFIAAASMDGSHFRKIITERITWPNAVAVDIFAEKIYWADAFLDTIESAN 506

  Fly   590 PDGTGRRTVL--DGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRTI-YAVHI 651
            .||||||.::  .|.:.|.:||||.:|.|||:||..:.:...:|.:|::..:||:...: |::.:
 Worm   507 MDGTGRRVIIADAGSVPHVFGLAIADDYLYWTDWTYRGILRANKHNGENITVLAQTALLPYSLKV 571

  Fly   652 YHPAKQPNSPHGCENATCSHLCLLAEPEIGGHSCACPDGMRLAPDHRRC 700
            :|.:.||.....||...|..||||.|.  |..:|||.:|..|..|.::|
 Worm   572 FHKSLQPEETSTCETRGCDQLCLLGEN--GAATCACGEGFDLLNDGKKC 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060 12/41 (29%)
LDLa 184..216 CDD:238060 13/51 (25%)
LDLa 227..262 CDD:238060 6/34 (18%)
LDLa 271..302 CDD:238060 6/34 (18%)
FXa_inhibition 352..387 CDD:291342 14/35 (40%)
Ldl_recept_b 442..482 CDD:278487 9/39 (23%)
LY 466..508 CDD:214531 14/42 (33%)
Ldl_recept_b 529..569 CDD:278487 20/39 (51%)
LY 553..595 CDD:214531 17/41 (41%)
LY 596..637 CDD:214531 15/42 (36%)
FXa_inhibition 669..700 CDD:291342 13/30 (43%)
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060
LDLa 1157..1189 CDD:197566
LDLa 1198..1232 CDD:238060
LDLa 1243..1279 CDD:238060
LDLa 1283..1318 CDD:238060
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:291342
EGF_CA 1418..1452 CDD:214542
F14B4.1NP_492474.2 vWFA <272..313 CDD:294047 19/40 (48%)
LY 343..383 CDD:214531 12/42 (29%)
LY 391..425 CDD:214531 14/36 (39%)
Ldl_recept_b 448..486 CDD:278487 19/37 (51%)
LY 470..512 CDD:214531 17/41 (41%)
LY 513..549 CDD:214531 13/35 (37%)
FXa_inhibition 588..618 CDD:291342 13/31 (42%)
LDLa 622..658 CDD:238060
LDLa 663..698 CDD:238060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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