Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001379135.1 | Gene: | lrp-1 / 172520 | WormBaseID: | WBGene00003071 | Length: | 4753 | Species: | Caenorhabditis elegans |
Alignment Length: | 2145 | Identity: | 584/2145 - (27%) |
---|---|---|---|
Similarity: | 895/2145 - (41%) | Gaps: | 433/2145 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 SADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQP--HG-ACLA 146
Fly 147 AELMCNGIDNCPGGEDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCT 211
Fly 212 DKSDEVAGCKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCGDGSDERG-------------CL 263
Fly 264 N-LCEPQK-------------------------GKFLCRNRETCLTLSEVCDGHSDCSDGSDETD 302
Fly 303 LCHSKPDCDAKKCALGAKCHMMPASGAECFCPKGFRL-AKFEDKCEDVDECKEQDDLCSQGCENT 366
Fly 367 SGGYRCVC--DAGYLL-----DKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMH-LREDNVRNHV 423
Fly 424 YQVA-GNLSKVIGVAYDGSHIYWTN-IQNEAESI-VKANGDGSNAEILLTSGLDAPEDLAVDWLT 485
Fly 486 QNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDWGEKPMIGRASMDGS 550
Fly 551 RSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDGM--LKHPYGLAIFE 613
Fly 614 DQLYWSDWATKSVHACHKFSGKDHRIL--AKDRTIYAVHI--YHPAKQPNS----------PHGC 664
Fly 665 ENATCSHLCLLAEPEIG---GHSCACPDGMRLAPDHRRCM-----LMEKRQRLFIG--------- 712
Fly 713 LGQVLLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILEFQPESH-ESNVLV 776
Fly 777 RSNLGNVSALAFDHLSRNLYWADTERAVIEVLSL---------QTRHRALIRFFPGQEV--PIGL 830
Fly 831 TVMPAEGYLYVVLKAKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGR 895
Fly 896 ISYSNYRVPHSQIFRGK-------------------------LRRPYSLAMVHHDLFWNELGTPR 935
Fly 936 IYWTHKSNMGPRKVIDIMEKDDPAAIMPYVPVATPNGIPLAASS----PVGQES--HPCQQQNGG 994
Fly 995 CSHICVG------EGPYHSICLCPAGFVYRDAGNRTC-------VEAL----DCEFRCHSGECLT 1042
Fly 1043 MNHRCNGRRDCVDNSDEMNCDEE-----HRRKPKVLCSPNQFACHSGEQCVDKERRCDNRKDCHD 1102
Fly 1103 HSDE--QHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELL--CEATSRCEPGMF 1163
Fly 1164 QCGSGSCIAGSWECDGRIDCSDGSDEHDKCVHRSCPP----DMQ-RCLLG-QCLDRSLVCDGHND 1222
Fly 1223 CGDKSDELNCGTDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDE----ADCGDVC 1283
Fly 1284 SIYEFKCRSGRECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDCQ 1348
Fly 1349 DGE--CVDLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDA 1411
Fly 1412 DQKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ---------SGATLLF 1467
Fly 1468 SSFNEVRN------LSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVI 1526
Fly 1527 VRALGLPAPTKLSVDWVTGNVY-VLSGAQEIQACSFVG-RMCGRIVH--VKSPRHVKHLAVDGYH 1587
Fly 1588 ARIFYIVIRTEGYGQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLER 1652
Fly 1653 ISYRLKTGPMRRPEIMLQKSNALMHPSGLSVYENNAFIVNLGSVEAVQCALYGSRICHKISI--- 1714
Fly 1715 ------------NVLNAQDIVVAGRSRQPQKASHPCAHAHCHGLCLQADYG-YECMC--GNRLVA 1764
Fly 1765 EGERCPHGSGNEVAVLGAVN--SLELEHEHEQNGHFHWLMALFVLAAGSLIAGLGYMYYQYRQRG 1827
Fly 1828 HTDLNINMHFQNPLATLGGTKAFLEH-ERAEAGVGFTTETGTVSS--RGSNDTFTTTSATSSFA- 1888
Fly 1889 -------AQQFSVPNALQR---------------LLRPRQSASG--DPMAQELLLESPSRESKLH 1929
Fly 1930 ALDGGGAGGDGDGGR-GVGRQVPDIL----VADMDDDAAKS-----------AGQFGG-NYAGND 1977
Fly 1978 1977 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | 16/33 (48%) |
LDLa | 131..166 | CDD:238060 | 11/37 (30%) | ||
LDLa | 184..216 | CDD:238060 | 13/31 (42%) | ||
LDLa | 227..262 | CDD:238060 | 16/47 (34%) | ||
LDLa | 271..302 | CDD:238060 | 13/30 (43%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 14/41 (34%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 13/41 (32%) | ||
LY | 466..508 | CDD:214531 | 16/41 (39%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 12/39 (31%) | ||
LY | 553..595 | CDD:214531 | 12/41 (29%) | ||
LY | 596..637 | CDD:214531 | 19/42 (45%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 11/33 (33%) | ||
LY | 774..815 | CDD:214531 | 14/49 (29%) | ||
LDLa | 1032..1062 | CDD:238060 | 12/29 (41%) | ||
LDLa | 1074..1109 | CDD:238060 | 12/36 (33%) | ||
LDLa | 1118..1152 | CDD:238060 | 16/35 (46%) | ||
LDLa | 1157..1189 | CDD:197566 | 14/31 (45%) | ||
LDLa | 1198..1232 | CDD:238060 | 18/39 (46%) | ||
LDLa | 1243..1279 | CDD:238060 | 13/39 (33%) | ||
LDLa | 1283..1318 | CDD:238060 | 20/34 (59%) | ||
LDLa | 1340..1371 | CDD:197566 | 7/32 (22%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 10/27 (37%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 9/33 (27%) | ||
lrp-1 | NP_001379135.1 | LDLa | 53..87 | CDD:238060 | 16/33 (48%) |
LDLa | 92..131 | CDD:238060 | 12/39 (31%) | ||
LDLa | 140..173 | CDD:238060 | 15/32 (47%) | ||
LDLa | 182..216 | CDD:238060 | 16/33 (48%) | ||
LDLa | 223..257 | CDD:238060 | 5/33 (15%) | ||
LDLa | 262..297 | CDD:238060 | 13/35 (37%) | ||
LY | 463..505 | CDD:214531 | 16/41 (39%) | ||
LY | 507..546 | CDD:214531 | 13/41 (32%) | ||
LY | 547..589 | CDD:214531 | 12/41 (29%) | ||
LY | 883..925 | CDD:214531 | 13/51 (25%) | ||
exchanger_TraA | <1054..1451 | CDD:411343 | 153/426 (36%) | ||
LDLa | 1057..1087 | CDD:197566 | 10/29 (34%) | ||
LDLa | 1146..1177 | CDD:197566 | 13/30 (43%) | ||
LDLa | 1187..1219 | CDD:238060 | 16/32 (50%) | ||
LDLa | 1228..1263 | CDD:238060 | 15/34 (44%) | ||
LDLa | 1270..1302 | CDD:238060 | 11/32 (34%) | ||
LDLa | 1313..1344 | CDD:238060 | 18/31 (58%) | ||
FXa_inhibition | 1447..1475 | CDD:405372 | 8/27 (30%) | ||
LY | 1511..1545 | CDD:214531 | 11/45 (24%) | ||
LY | 1548..1585 | CDD:214531 | 11/36 (31%) | ||
LY | 1590..1634 | CDD:214531 | 15/52 (29%) | ||
LY | 1635..1677 | CDD:214531 | 6/44 (14%) | ||
Ldl_recept_b | 1943..1986 | CDD:423042 | 11/42 (26%) | ||
LY | 1971..2012 | CDD:214531 | 8/41 (20%) | ||
LY | 2015..2052 | CDD:214531 | |||
LY | 2193..2239 | CDD:214531 | |||
LY | 2240..2283 | CDD:214531 | |||
LY | 2284..2325 | CDD:214531 | |||
LY | 2570..2612 | CDD:214531 | |||
LY | 2613..2655 | CDD:214531 | |||
LDLa | 2794..2824 | CDD:197566 | |||
LDLa | 2834..2868 | CDD:238060 | |||
LDLa | 2874..2907 | CDD:197566 | |||
LDLa | 2961..2994 | CDD:238060 | |||
LDLa | 3012..3038 | CDD:238060 | |||
LDLa | 3048..3088 | CDD:197566 | |||
LDLa | 3099..3131 | CDD:197566 | |||
LDLa | 3140..3174 | CDD:238060 | |||
LDLa | 3186..3218 | CDD:197566 | |||
FXa_inhibition | 3276..3305 | CDD:405372 | |||
LY | 3382..3424 | CDD:214531 | |||
Ldl_recept_b | 3445..3490 | CDD:395012 | |||
LY | 3476..3516 | CDD:214531 | |||
FXa_inhibition | 3586..3623 | CDD:405372 | |||
LDLa | 3627..3660 | CDD:197566 | |||
LDLa | 3671..3705 | CDD:238060 | |||
LDLa | 3792..3825 | CDD:197566 | |||
LDLa | 3837..3868 | CDD:238060 | |||
LDLa | 3878..3912 | CDD:238060 | |||
LDLa | 3917..3951 | CDD:238060 | |||
LDLa | 3958..3990 | CDD:197566 | |||
LDLa | 4049..4083 | CDD:238060 | |||
FXa_inhibition | 4097..>4121 | CDD:405372 | |||
EGF_CA | 4132..4163 | CDD:214542 | |||
NHL | 4219..>4431 | CDD:302697 | |||
NHL repeat | 4219..4257 | CDD:271320 | |||
NHL repeat | 4267..4330 | CDD:271320 | |||
NHL repeat | 4333..4371 | CDD:271320 | |||
NHL repeat | 4373..4410 | CDD:271320 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
5 | 4.670 |