Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491270.2 | Gene: | lrp-2 / 171981 | WormBaseID: | WBGene00003072 | Length: | 4858 | Species: | Caenorhabditis elegans |
Alignment Length: | 2611 | Identity: | 542/2611 - (20%) |
---|---|---|---|
Similarity: | 838/2611 - (32%) | Gaps: | 1045/2611 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 CQRTHLIINGRHVAISLLLLVGLCGGTAAGTPGSADTR-------CDAGQFQCRDGGCILQAKMC 109
Fly 110 DGRGDCKDSSDELDC-DYRLCRPPHWFPCAQPHGACLAAELMCNGIDNCPGGEDELNCPVRPGFR 173
Fly 174 FGDTAHRMRSCSKY-EFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHL-CAN 236
Fly 237 GRCLRRKQWVCDGVDDCGDGSDERGCLNL--------CEPQKGKFLCRNRE-TCLTLSEVCDGHS 292
Fly 293 DCSDGSDETDLCHSKPDC-DAKKCALGAKCHMMPASGAECFCPKGFRLAKFEDKCEDVDECKEQD 356
Fly 357 DLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLRE----- 416
Fly 417 --DNVRNHV-----YQVAGNLSKVIGVAYDGSHIYWTNIQNEAESIVKANGDGSN---AEILLTS 471
Fly 472 GLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDVHQPRSLAVWPQKGLMFWTDW 536
Fly 537 GE-KPMIGRASMDGSRSRPIV--SDNIE---WPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGR 595
Fly 596 RTVL--DGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKDRT-IYAVHIYHPAKQ 657
Fly 658 P-NSPHGCENATCSHLCL----------------------------------------------- 674
Fly 675 ----------------------------------------------------------------- 674
Fly 675 ----------------------------LAE-----------------------------PEI-- 680
Fly 681 ---------------------------------------------------------GG------ 682
Fly 683 ---------------------------------------------HS------------------ 684
Fly 685 ------------------CACPDGMRL------APDHRRCMLMEKRQRLFIG------LGQVLLE 719
Fly 720 IE----HTAFGRHQVSKSYTLPCLI----NEMVY-----NRI-----NGS---LIIADNDQRL-- 761
Fly 762 -----------------------ILEFQPESH-------------------------------ES 772
Fly 773 NVLVRSNL-----------GNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHR----------- 815
Fly 816 -----------------------------------------ALIRFFPGQEV------------- 826
Fly 827 ----------------------------------------------------------------- 826
Fly 827 -PIGLT--------------------------------------------------------VMP 834
Fly 835 AEGY------LY--------------------------------VVLKAKRH------------- 848
Fly 849 ------SHIDKIPLSG-KGEQVHVFEDDLGDDDIK-LVTDYETQTIFWSDSDLGRISYSNYRVPH 905
Fly 906 SQIFRGKLR----RPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKD-DPAAIMPYV 965
Fly 966 PVATPNGIPLAASSPVGQESHPCQ-----QQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTC 1025
Fly 1026 VEALD---C---EFRC-HSGECLTMNHRCNGRRDC--VDNSDEMNCDEEHRRKPKVLCSPNQFAC 1081
Fly 1082 HSGEQCVDKERRCDNRKDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDN 1146
Fly 1147 SDELLCEATSRCE-------PGMFQCGSGS-CIAGSWECDGRIDCSDGSDEHDKCVH-------- 1195
Fly 1196 ---RSCPPDMQ-RCLLGQ-CLDRSLVCDGHNDCGDKSDELNCGTDSSTMNISCAEDQYQCTSNLK 1255
Fly 1256 ICLPSTVRCNGTTECPRGEDEADCGDVCSI----YEFKCRSGRECIRREFRCDGQKDCGD----- 1311
Fly 1312 GSDELSCELEK-GHHNQSQ-------------------IQPWS---------TSSRSCRPHLFDC 1347
Fly 1348 QDGECVDLSRVCNNFPDCTNGHDE-------------GPKCATACRSASG-------RQVC---- 1388
Fly 1389 -------------QHKCRAT------------PAG-AVCSCFDGYRLDA-DQKSCLDIDECQEQQ 1426
Fly 1427 PCAQLC-ENTLGGYQCQCHADFMLRQDRVSCKSLQSGATLLFSSFNEVRNLSEQPVMLNVAWSAN 1490
Fly 1491 DSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIV--------RALGLPA------------- 1534
Fly 1535 -PTK----LSVDWVTGNVYVLSGAQE-IQACSFVGRMCGRIVHVKSP-RHVKHLAVDGYHARIFY 1592
Fly 1593 IVIRTEGYGQTSSEIHMARLDGSRRDMLLQ-RSESFMTALTTDPHQQLLYFVDQHMRTLERISYR 1656
Fly 1657 LKTGPMRRPEIMLQKSNALMHPSGLSVYENNAFIVNL--GSVEAVQCALYGSRICHKIS-INVLN 1718
Fly 1719 AQDIVVAGRSRQP----------------QKASHPCAH-AHCHGLCLQADY--------GYECMC 1758
Fly 1759 GNRLVAEGERC 1769 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | 15/33 (45%) |
LDLa | 131..166 | CDD:238060 | 10/34 (29%) | ||
LDLa | 184..216 | CDD:238060 | 13/32 (41%) | ||
LDLa | 227..262 | CDD:238060 | 20/35 (57%) | ||
LDLa | 271..302 | CDD:238060 | 10/31 (32%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 9/34 (26%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 10/42 (24%) | ||
LY | 466..508 | CDD:214531 | 15/41 (37%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 24/45 (53%) | ||
LY | 553..595 | CDD:214531 | 22/46 (48%) | ||
LY | 596..637 | CDD:214531 | 12/42 (29%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 19/351 (5%) | ||
LY | 774..815 | CDD:214531 | 10/51 (20%) | ||
LDLa | 1032..1062 | CDD:238060 | 11/32 (34%) | ||
LDLa | 1074..1109 | CDD:238060 | 11/34 (32%) | ||
LDLa | 1118..1152 | CDD:238060 | 12/33 (36%) | ||
LDLa | 1157..1189 | CDD:197566 | 16/39 (41%) | ||
LDLa | 1198..1232 | CDD:238060 | 14/35 (40%) | ||
LDLa | 1243..1279 | CDD:238060 | 14/35 (40%) | ||
LDLa | 1283..1318 | CDD:238060 | 17/43 (40%) | ||
LDLa | 1340..1371 | CDD:197566 | 11/30 (37%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 15/58 (26%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 8/34 (24%) | ||
lrp-2 | NP_491270.2 | LDLa | 80..119 | CDD:197566 | |
LDLa | 130..162 | CDD:197566 | |||
LY | 668..702 | CDD:214531 | |||
LY | 707..758 | CDD:214531 | |||
LY | 759..801 | CDD:214531 | |||
LDLa | 968..1000 | CDD:197566 | |||
LDLa | 1013..1047 | CDD:238060 | 9/38 (24%) | ||
LDLa | 1053..1087 | CDD:238060 | 15/33 (45%) | ||
LDLa | 1098..1129 | CDD:238060 | 10/30 (33%) | ||
LDLa | 1144..1175 | CDD:238060 | 13/32 (41%) | ||
LDLa | 1182..1216 | CDD:238060 | 19/33 (58%) | ||
FXa_inhibition | 1276..1305 | CDD:291342 | 8/29 (28%) | ||
LY | 1421..1463 | CDD:214531 | 15/41 (37%) | ||
LY | 1465..1508 | CDD:214531 | 19/43 (44%) | ||
LY | 1521..1555 | CDD:214531 | 18/33 (55%) | ||
LY | 2480..2521 | CDD:214531 | 11/44 (25%) | ||
LDLa | 2681..2715 | CDD:238060 | 11/34 (32%) | ||
LDLa | 2717..2751 | CDD:238060 | 12/33 (36%) | ||
LDLa | <2774..2798 | CDD:238060 | 15/23 (65%) | ||
LDLa | 2819..2851 | CDD:238060 | 13/31 (42%) | ||
LDLa | 2856..2891 | CDD:238060 | 14/35 (40%) | ||
LDLa | 2904..2938 | CDD:238060 | 16/34 (47%) | ||
LDLa | 2988..3020 | CDD:197566 | 11/31 (35%) | ||
LY | 3231..3270 | CDD:214531 | 10/38 (26%) | ||
Ldl_recept_b | 3296..3336 | CDD:278487 | 12/45 (27%) | ||
LY | 3319..3362 | CDD:214531 | 14/45 (31%) | ||
LY | 3363..3404 | CDD:214531 | 13/58 (22%) | ||
LDLa | 3481..3514 | CDD:197566 | |||
LDLa | 3574..3609 | CDD:238060 | |||
LDLa | 3614..3649 | CDD:197566 | |||
LDLa | 3659..3693 | CDD:238060 | |||
LDLa | 3881..3912 | CDD:238060 | |||
LY | 4084..4125 | CDD:214531 | |||
LY | 4139..4181 | CDD:214531 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100345 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |