DRSC/TRiP Functional Genomics Resources

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Protein Alignment yl and C9

DIOPT Version :9

Sequence 1:NP_996433.1 Gene:yl / 32367 FlyBaseID:FBgn0004649 Length:1984 Species:Drosophila melanogaster
Sequence 2:NP_038513.2 Gene:C9 / 12279 MGIID:1098282 Length:548 Species:Mus musculus


Alignment Length:91 Identity:31/91 - (34%)
Similarity:45/91 - (49%) Gaps:10/91 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1156 SRCEPGMFQCGSGSCIAGSWECDGRIDCSD------GSDEHDKC--VHRSCPPDMQRCLLGQCLD 1212
            |.|:|.:.|......|....:.:|: .|.|      |.:...:|  :..:|..|.| |..|:|:.
Mouse    50 SECDPCLKQRFRSRSILAFGQFNGK-SCVDVLGDRQGCEPTQECEEIQENCGNDFQ-CETGRCIK 112

  Fly  1213 RSLVCDGHNDCGDKSDELNCGTDSST 1238
            |.|:|:|.|||||.|||.:|..|..|
Mouse   113 RRLLCNGDNDCGDYSDENDCDDDPRT 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ylNP_996433.1 LDLa 90..124 CDD:238060
LDLa 131..166 CDD:238060
LDLa 184..216 CDD:238060
LDLa 227..262 CDD:238060
LDLa 271..302 CDD:238060
FXa_inhibition 352..387 CDD:291342
Ldl_recept_b 442..482 CDD:278487
LY 466..508 CDD:214531
Ldl_recept_b 529..569 CDD:278487
LY 553..595 CDD:214531
LY 596..637 CDD:214531
FXa_inhibition 669..700 CDD:291342
LY 774..815 CDD:214531
LDLa 1032..1062 CDD:238060
LDLa 1074..1109 CDD:238060
LDLa 1118..1152 CDD:238060
LDLa 1157..1189 CDD:197566 8/37 (22%)
LDLa 1198..1232 CDD:238060 18/33 (55%)
LDLa 1243..1279 CDD:238060
LDLa 1283..1318 CDD:238060
LDLa 1340..1371 CDD:197566
FXa_inhibition 1388..1416 CDD:291342
EGF_CA 1418..1452 CDD:214542
C9NP_038513.2 TSP1 43..93 CDD:214559 9/43 (21%)
Ldl_recept_a 101..132 CDD:333805 17/31 (55%)
MACPF 292..506 CDD:214671
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8437
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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