Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031762503.1 | Gene: | sorl1 / 100490681 | XenbaseID: | XB-GENE-995776 | Length: | 2199 | Species: | Xenopus tropicalis |
Alignment Length: | 1754 | Identity: | 397/1754 - (22%) |
---|---|---|---|
Similarity: | 593/1754 - (33%) | Gaps: | 688/1754 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 132 PHWFPCAQPHGACLAAELMCNGIDNCPGGEDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRT 196
Fly 197 CIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGE--------GHLCANGRCLRRKQWVCDGVD-- 251
Fly 252 -----DCGDG-------SDERG--CLNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSD-ET 301
Fly 302 DLCHSKPDCDAK--KCALGAK---------CHMMPASGAECF-----CP--------KGFRLAKF 342
Fly 343 EDKCEDVDECKEQDDLCSQG-CENTSGGYRCVCDAGYLLDKDNRTCRAVVYGSKEQQPLLLYTTQ 406
Fly 407 MTIMGMHLREDNVRNHVYQVAGNLSKVI-----------GVA----YDGSHIYWTNIQNEAESIV 456
Fly 457 KANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDG-LNCAVLVTQDVHQPR 520
Fly 521 SLAVWPQKGLMFWTDWG-EKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGS 584
Fly 585 VQTVRPDGTGRRTVLDGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSG-KDHRILAKDRTIYA 648
Fly 649 VHIYHPAKQPNSPHGCENATCSHLCLLAEPEIGGHS-CACPDGMRLAPDHRRCMLMEKRQRLFIG 712
Fly 713 LGQVLLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIA------DNDQRLILEFQPESHE 771
Fly 772 SNVLVRSNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPGQEVPIGLTVMPAE 836
Fly 837 GYLYVVLKAKRHSHIDKIPLSGKGEQVHVFEDDLGDDDIKLVTDYETQTIFWSDSDLGRISYSNY 901
Fly 902 RVPHSQIFRGKLRRPYSLAMVHHDLFWNELGTPRIYWTHKSNMGPRKVIDIMEKDDPAAIMPYVP 966
Fly 967 VATPNGIPLAASSPVGQESHPCQQQNGGCSHICVGEGPYHSICLCPAGFVYRDAGNRTCVEALDC 1031
Fly 1032 EFRCHSGECLTMNHRCNGRRDCVDNSDEMNCDE-EHRRKPKVLCSPNQFACHSGEQCVDKERRCD 1095
Fly 1096 NRKDCHDHSDEQH--CEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCGDNSDELLCEA---- 1154
Fly 1155 --------------------------------------------TSRCEPGMFQCGSGSCIAGSW 1175
Fly 1176 ECDGRIDCSDGSDEHDKCVHRSCPPDMQR-----CLLGQCLDRSLVCDGHNDCGDKSDELNCG-- 1233
Fly 1234 -TDSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADC---------------GDV 1282
Fly 1283 CSIYEFKCRSGRECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFD- 1346
Fly 1347 ---CQDGE-CVDLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQH-KCRATPAGAV------ 1400
Fly 1401 ------CSCFDG--YRLDAD------------------------------QKSCL-------DI- 1419
Fly 1420 ---------DECQEQQPCAQLCE--NTLGGYQCQCHADFMLRQDRV--SCKSLQSGATLLFSSFN 1471
Fly 1472 E-VRNLSEQPVMLNVAWSANDSRITGFDLAMHRQMGYFSAEDEGIVYQIDLQTKVIVRALG--LP 1533
Fly 1534 APT----KLSVDWVTGNVYVLSGAQEIQA----CSFVGRMCGRIVHVKSPRHVKHLAVDGYHARI 1590
Fly 1591 FYIVIRTEGY------GQTSSEIHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMR 1648 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | |
LDLa | 131..166 | CDD:238060 | 8/33 (24%) | ||
LDLa | 184..216 | CDD:238060 | 4/31 (13%) | ||
LDLa | 227..262 | CDD:238060 | 13/58 (22%) | ||
LDLa | 271..302 | CDD:238060 | 7/31 (23%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 10/35 (29%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 12/39 (31%) | ||
LY | 466..508 | CDD:214531 | 18/42 (43%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 22/40 (55%) | ||
LY | 553..595 | CDD:214531 | 13/41 (32%) | ||
LY | 596..637 | CDD:214531 | 15/41 (37%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 10/31 (32%) | ||
LY | 774..815 | CDD:214531 | 5/40 (13%) | ||
LDLa | 1032..1062 | CDD:238060 | 14/29 (48%) | ||
LDLa | 1074..1109 | CDD:238060 | 14/36 (39%) | ||
LDLa | 1118..1152 | CDD:238060 | 16/33 (48%) | ||
LDLa | 1157..1189 | CDD:197566 | 15/31 (48%) | ||
LDLa | 1198..1232 | CDD:238060 | 15/38 (39%) | ||
LDLa | 1243..1279 | CDD:238060 | 10/35 (29%) | ||
LDLa | 1283..1318 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1340..1371 | CDD:197566 | 13/35 (37%) | ||
FXa_inhibition | 1388..1416 | CDD:291342 | 8/72 (11%) | ||
EGF_CA | 1418..1452 | CDD:214542 | 10/45 (22%) | ||
sorl1 | XP_031762503.1 | VPS10 | 115..744 | CDD:214740 | 57/292 (20%) |
LY | 777..812 | CDD:214531 | 8/35 (23%) | ||
LY | 815..854 | CDD:214531 | 15/38 (39%) | ||
Ldl_recept_b | 879..920 | CDD:395012 | 22/40 (55%) | ||
LY | 904..944 | CDD:214531 | 13/41 (32%) | ||
LY | 944..982 | CDD:214531 | 15/38 (39%) | ||
LDLa | 1069..1103 | CDD:238060 | 12/60 (20%) | ||
LDLa | 1114..1144 | CDD:238060 | 14/87 (16%) | ||
Ldl_recept_a | 1148..1183 | CDD:395011 | 15/74 (20%) | ||
LDLa | 1189..1221 | CDD:197566 | 11/32 (34%) | ||
LDLa | 1231..1262 | CDD:238060 | 15/32 (47%) | ||
LDLa | 1272..1299 | CDD:197566 | 0/26 (0%) | ||
LDLa | 1316..1350 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1363..1394 | CDD:238060 | 13/30 (43%) | ||
LDLa | 1408..1442 | CDD:238060 | 10/35 (29%) | ||
LDLa | 1460..1495 | CDD:238060 | 17/34 (50%) | ||
LDLa | 1509..1537 | CDD:238060 | 13/32 (41%) | ||
FN3 | 1546..1617 | CDD:214495 | 7/70 (10%) | ||
FN3 | 1639..1730 | CDD:238020 | 23/113 (20%) | ||
FN3 | 1922..2003 | CDD:214495 | |||
FN3 | 2013..2100 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |