Sequence 1: | NP_996433.1 | Gene: | yl / 32367 | FlyBaseID: | FBgn0004649 | Length: | 1984 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004914072.1 | Gene: | lrp8 / 100489827 | XenbaseID: | XB-GENE-980035 | Length: | 936 | Species: | Xenopus tropicalis |
Alignment Length: | 927 | Identity: | 279/927 - (30%) |
---|---|---|---|
Similarity: | 429/927 - (46%) | Gaps: | 206/927 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 61 GRHVAISLLLLVGLCGGTAAGTPGSADTRCDAGQFQCRDGGCILQAKMCDGRGDCKDSSDELDC- 124
Fly 125 ------DYRLCRPPH-----W------------------------------FPCAQP-------- 140
Fly 141 ------------------------------HGACLAAELMCNGIDNCPGGEDELNC-PV--RPG- 171
Fly 172 FRFGDT-----------------------AH--------RMRSCSKYEFMCQQDRTCIPIDFMCD 205
Fly 206 GRPDCTDKSDEVAGCKQAEITCPGEGHLCANGRCLR-RKQWVCDGVDDCGDGSDERGCLNLCEPQ 269
Fly 270 K--GKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCAL--GAKCHMMP--ASG 328
Fly 329 AECFCPKGFRLAKFEDK--CEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDKDNRTCRAVV 391
Fly 392 YGSKEQQPLLLYTTQMTIMGMHLRE-DNVRNHVYQVAGNLSKVIG--VAYDGSHIYWTNI--QNE 451
Fly 452 AESIVKANGDGSNAEILLTSGLDAPEDLAVDWLTQNIYFSDNIMRHIAVCSNDGLNCAVLVTQDV 516
Fly 517 HQPRSLAVWPQKGLMFWTDWGEKPMIGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAK 581
Fly 582 LGSVQTVRPDGTGRRTVL--DGMLKHPYGLAIFEDQLYWSDWATKSVHACHKFSGKDHRILAKD- 643
Fly 644 RTIYAVHIYHPAKQPNSPHGCE-----NATCSHLCLLAEPEIGGHS----CACPDGMRLAPDHRR 699
Fly 700 CMLMEKRQRLFIGLGQVLLEIEHTAFGRHQVSKSYTLPCLINEMVYNRINGSLIIADNDQRLILE 764
Fly 765 FQPESHESNVLVR------SNLGNVSALAFDHLSRNLYWADTERAVIEVLSLQTRHRALIRFFPG 823
Fly 824 QEVPIG-LTVMPAEGYL 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
yl | NP_996433.1 | LDLa | 90..124 | CDD:238060 | 17/33 (52%) |
LDLa | 131..166 | CDD:238060 | 15/107 (14%) | ||
LDLa | 184..216 | CDD:238060 | 14/31 (45%) | ||
LDLa | 227..262 | CDD:238060 | 15/35 (43%) | ||
LDLa | 271..302 | CDD:238060 | 15/30 (50%) | ||
FXa_inhibition | 352..387 | CDD:291342 | 14/34 (41%) | ||
Ldl_recept_b | 442..482 | CDD:278487 | 10/41 (24%) | ||
LY | 466..508 | CDD:214531 | 15/41 (37%) | ||
Ldl_recept_b | 529..569 | CDD:278487 | 21/39 (54%) | ||
LY | 553..595 | CDD:214531 | 22/41 (54%) | ||
LY | 596..637 | CDD:214531 | 12/42 (29%) | ||
FXa_inhibition | 669..700 | CDD:291342 | 19/34 (56%) | ||
LY | 774..815 | CDD:214531 | 8/46 (17%) | ||
LDLa | 1032..1062 | CDD:238060 | |||
LDLa | 1074..1109 | CDD:238060 | |||
LDLa | 1118..1152 | CDD:238060 | |||
LDLa | 1157..1189 | CDD:197566 | |||
LDLa | 1198..1232 | CDD:238060 | |||
LDLa | 1243..1279 | CDD:238060 | |||
LDLa | 1283..1318 | CDD:238060 | |||
LDLa | 1340..1371 | CDD:197566 | |||
FXa_inhibition | 1388..1416 | CDD:291342 | |||
EGF_CA | 1418..1452 | CDD:214542 | |||
lrp8 | XP_004914072.1 | LDLa | 32..66 | CDD:238060 | 17/33 (52%) |
LDLa | 70..102 | CDD:197566 | 4/31 (13%) | ||
Ldl_recept_a | 114..150 | CDD:365841 | 3/35 (9%) | ||
LDLa | 154..188 | CDD:238060 | 10/33 (30%) | ||
LDLa | 192..224 | CDD:197566 | 5/31 (16%) | ||
LDLa | 241..275 | CDD:238060 | 16/35 (46%) | ||
Ldl_recept_a | 279..314 | CDD:365841 | 16/36 (44%) | ||
LDLa | 323..353 | CDD:238060 | 13/30 (43%) | ||
FXa_inhibition | 363..397 | CDD:373209 | 12/36 (33%) | ||
EGF_CA | 399..429 | CDD:214542 | 15/30 (50%) | ||
LY | 467..502 | CDD:214531 | 7/34 (21%) | ||
LY | 512..553 | CDD:214531 | 15/40 (38%) | ||
Ldl_recept_b | 574..614 | CDD:278487 | 21/39 (54%) | ||
LY | 598..640 | CDD:214531 | 22/41 (54%) | ||
Ldl_recept_b | 661..699 | CDD:278487 | 7/37 (19%) | ||
FXa_inhibition | 719..756 | CDD:373209 | 20/37 (54%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002088 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |