DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG11584 and Pou2af1

DIOPT Version :9

Sequence 1:	NP_572941.1	Gene:	CG11584 / 32363	FlyBaseID:	FBgn0030541	Length:	662	Species:	Drosophila melanogaster
Sequence 2:	NP_001103069.1	Gene:	Pou2af1 / 690528	RGDID:	1594728	Length:	256	Species:	Rattus norvegicus

Alignment Length:	287	Identity:	71/287 - (24%)
Similarity:	96/287 - (33%)	Gaps:	87/287 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly   135 TAAKNAYLPPAPVQQFVPAPEPVVANIAPQQETITTTYNAPAAAPVPAPAPIAIPVPAVQEQHQV 199
            ||::.|..||.|.|. |...|||       :|.:.......:......||.:.:|       ||.
  Rat     7 TASEQAPAPPRPYQG-VRVKEPV-------KELLRRKRGHTSVGTAGPPAAVVLP-------HQP 56

  Fly   200 IQQTYSVPAPAPAVQQSYSAPAPAPVVQQTYSAPAPVVQEQTYTAAAPVQAVQQLTYSAPAPVTQ 264
            : .|||...|: .:....|||.              |.:|.|..|.         ..|.|||.|.
  Rat    57 L-ATYSTVGPS-CLDMEVSAPT--------------VTEEGTLCAG---------WLSQPAPATL 96

  Fly   265 EQYYSAPASVVQQTSSAP-APAPAPVQEQFYSAPAPAIQQTYSAPAPAPVVQQTYSAPAPAPQQT 328
            :..             || .|....|..:..|.|       |||......|..:|:...|:...|
  Rat    97 QPL-------------APWTPYTEYVSHEAVSCP-------YSADMYVQPVCPSYTVVGPSSVLT 141

  Fly   329 YSAPAPAVQEQTQVVQSYSAPAPAP-------VAQQTY-SYPAPVVQQAPVVQAVAQQAPVVQQS 385
            |::| |.:...|.  :|.:.||..|       .|..|| .:|.|:           ...|.....
  Rat   142 YASP-PLITNVTP--RSTATPAVGPQLEGPEHQAPLTYFPWPQPL-----------STLPTSSLQ 192

  Fly   386 YSAPAPA----PVVQQTYSAPAPVVQE 408
            |..|||.    ..||...|.|.||:|:
  Rat   193 YQPPAPTLSGPQFVQLPISIPEPVLQD 219

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11584	NP_572941.1	rne	<209..408	CDD:236766	50/211 (24%)
		rne	<329..539	CDD:236766	25/92 (27%)
		TFIIA	475..>635	CDD:281188
Pou2af1	NP_001103069.1	PD-C2-AF1	7..255	CDD:286403	71/287 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR15363
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100