DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1368 and CG2962

DIOPT Version :9

Sequence 1:NP_572939.1 Gene:CG1368 / 32361 FlyBaseID:FBgn0030539 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_572612.2 Gene:CG2962 / 31952 FlyBaseID:FBgn0030186 Length:376 Species:Drosophila melanogaster


Alignment Length:170 Identity:65/170 - (38%)
Similarity:81/170 - (47%) Gaps:47/170 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ACVAADVSHLSNEYLPPVQSSYAAPSVSYSAPAVQQTYAAPAIQQSYVAPSNEYLPPVQTYSAPA 75
            |.|||.|:    .||||  ...|||:..|:|||....|||||              |...|||||
  Fly   240 APVAAPVA----SYLPP--QEIAAPAPVYAAPAPAPVYAAPA--------------PAPVYSAPA 284

  Fly    76 VQRTYSAPAVQRTYSAPSVS--YSAPSVSYSAPSVSYSAPAVQQSYSAPSVSYSAPAVQQSYSAP 138
            ....|||||....||||:.:  ||||     ||:.:||||       ||:..|||||....|:||
  Fly   285 PAPVYSAPAPAPVYSAPAPAPVYSAP-----APAPAYSAP-------APAPVYSAPAPAPVYAAP 337

  Fly   139 SVSYSAPAVQQSYSAPAVSYS----------APSVSYSAP 168
            :   .||.:...:.|||..::          ||:.:|..|
  Fly   338 A---PAPVLSVPHPAPAPVFAPEEQSLPIGHAPAQTYGPP 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1368NP_572939.1 PRK10263 <13..>170 CDD:236669 64/168 (38%)
CG2962NP_572612.2 DUF4766 57..189 CDD:292595
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR15363
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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