DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1368 and Pou2af1

DIOPT Version :9

Sequence 1:NP_572939.1 Gene:CG1368 / 32361 FlyBaseID:FBgn0030539 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_035266.1 Gene:Pou2af1 / 18985 MGIID:105086 Length:256 Species:Mus musculus


Alignment Length:136 Identity:33/136 - (24%)
Similarity:49/136 - (36%) Gaps:31/136 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AADVSHLSNEYLPPVQSSYAAPSVSYSAPAVQQTYAAPAIQQSYVAPSNEYLPPVQTYSAPAVQR 78
            |....:.::.|:.||     .||.:...|:...|||:               ||:.|...|   |
Mouse   113 AVSCPYSTDMYVQPV-----CPSYTVVGPSSVLTYAS---------------PPLITNVTP---R 154

  Fly    79 TYSAPAVQRTYSAPSVSYSAPSVSYSAPSVSYSAPAVQQSYSAPSVSYSAPA-VQQSYSAPSVSY 142
            :.:.|||......|  .:.||...:..|....:.|.....|..|:.:.|.|. ||...|.|.   
Mouse   155 STATPAVGPQLEGP--EHQAPLTYFPWPQPLSTLPTSSLQYQPPAPTLSGPQFVQLPISIPE--- 214

  Fly   143 SAPAVQ 148
              |.:|
Mouse   215 --PVLQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1368NP_572939.1 PRK10263 <13..>170 CDD:236669 33/136 (24%)
Pou2af1NP_035266.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
PD-C2-AF1 7..255 CDD:312716 33/136 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15363
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.