DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HOXD10 and Dfd

DIOPT Version :10

Sequence 1:NP_002139.2 Gene:HOXD10 / 3236 HGNCID:5133 Length:340 Species:Homo sapiens
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:228 Identity:63/228 - (27%)
Similarity:101/228 - (44%) Gaps:62/228 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   159 ATGKTQEYNNSPEGSSTVMLQLNPRGAAKPQLSAAQLQ-----MEKKMNEPV------------- 205
            :.|.|....:||. |..:.|.|.......|..:|..||     :||::.|.|             
  Fly   224 SVGSTHSQGHSPH-SQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRL 287

Human   206 ----SGQEPTKVSQVE------SPEAKGGLPEERSCLAEVSVSSPEVQEKESKEEIKSDTPTSN- 259
                .|.|...:|:.:      ||:..|.           :.:..::.:.:|.|::.::|.... 
  Fly   288 RCDDMGSENDDMSEEDRLMLDRSPDELGS-----------NDNDDDLGDSDSDEDLMAETTDGER 341

Human   260 ----WL--------------TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLT 306
                |:              .....:::|..||:||.|||||||.:|.||||.||:||:.::.|:
  Fly   342 IIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLS 406

Human   307 DRQVKIWFQNRRMKLK---KMSRENRIRELTAN 336
            :||:||||||||||.|   |:.....:|:.|.:
  Fly   407 ERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVD 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD10NP_002139.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..268 12/109 (11%)
Homeodomain 267..323 CDD:459649 35/58 (60%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 34/55 (62%)

Return to query results.
Submit another query.