DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and RAD6

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_011457.1 Gene:RAD6 / 852822 SGDID:S000003026 Length:172 Species:Saccharomyces cerevisiae


Alignment Length:146 Identity:50/146 - (34%)
Similarity:96/146 - (65%) Gaps:0/146 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVR 70
            ||::::.:|:.::..||::|.|..:|...::.::.||.|:|:|.|.|:|.|...|:||...|.|:
Yeast     7 RRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVK 71

  Fly    71 FITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAE 135
            |:::::|||:...|.||||:|:::|:|...:.:||.|||:|.:.|||..|...:.|.|:|.::::
Yeast    72 FLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQ 136

  Fly   136 AIRNAREWTQKYAVED 151
            .::..:|..:|...:|
Yeast   137 YVKRVKETVEKSWEDD 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 48/140 (34%)
RAD6NP_011457.1 UBCc_UBE2A_2B 3..145 CDD:467410 48/137 (35%)

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