DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2b

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002747.1 Gene:ube2b / 437020 ZFINID:ZDB-GENE-040718-247 Length:152 Species:Danio rerio


Alignment Length:130 Identity:54/130 - (41%)
Similarity:88/130 - (67%) Gaps:0/130 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVR 70
            ||::::.:||.::|..|::..|.|||...::.::.||..:|||.|.|||.:...|:||...|.||
Zfish     7 RRLMRDFKRLQEDPPTGVSGAPSENNIMLWNAVIFGPVGTPFEDGTFKLVIEFSEEYPNKPPTVR 71

  Fly    71 FITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAE 135
            |::|::|||:...|.||||:|:::|||...:.:||.|||:||..|||:.|..:..|:|::.|:.|
Zfish    72 FVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136

  Fly   136  135
            Zfish   137  136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 54/130 (42%)
ube2bNP_001002747.1 UBCc_UBE2A_2B 3..145 CDD:467410 54/130 (42%)

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