DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and CG5823

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_650631.1 Gene:CG5823 / 42105 FlyBaseID:FBgn0038515 Length:283 Species:Drosophila melanogaster


Alignment Length:116 Identity:37/116 - (31%)
Similarity:56/116 - (48%) Gaps:9/116 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRF 71
            |:.::..||.::|:|.|.|.|..||...:|..|.||.|||:.||.:...|..|.::|...|.:..
  Fly    18 RMKQDYMRLKRDPLPYITAEPLPNNILEWHYCVKGPEDSPYYGGYYHGTLLFPREFPFKPPSIYM 82

  Fly    72 ITKIYHPN--IDRLGRICL---DVLKDKWSPALQIRTILLSIQALLSAPNP 117
            :|    ||  .....|:||   |...|.|:|...:.|||..:.:.:....|
  Fly    83 LT----PNGRFKTNTRLCLSISDFHPDTWNPTWCVGTILTGLLSFMLESTP 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 37/116 (32%)
CG5823NP_650631.1 UBCc_UBE2J 18..149 CDD:467419 37/116 (32%)

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