DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2l3a

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002072.1 Gene:ube2l3a / 415162 ZFINID:ZDB-GENE-030131-2977 Length:154 Species:Danio rerio


Alignment Length:144 Identity:50/144 - (34%)
Similarity:86/144 - (59%) Gaps:3/144 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPGINAIP-DENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKV 69
            ||:.||...:.:..:.....|. ||:|...:..::. |::.|::.|.|::|:..|.:||...||:
Zfish     5 RRLHKELDEIRKSGMKNFRNIQVDESNILTWQGLIV-PDNPPYDKGAFRIEITFPAEYPFKPPKI 68

  Fly    70 RFITKIYHPNIDRLGRICLDVLK-DKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNE 133
            .|.|||||||||..|::||.|:. :.|.||.:...::.|:.||::.|.|:.||..|:||.:..:.
Zfish    69 TFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDR 133

  Fly   134 AEAIRNAREWTQKY 147
            .:..:||.|:|:|:
Zfish   134 KKFFKNAEEFTKKH 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 49/142 (35%)
ube2l3aNP_001002072.1 UBCc_UBE2L3 3..149 CDD:467421 50/144 (35%)

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