DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2m

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_988956.1 Gene:ube2m / 394553 XenbaseID:XB-GENE-1005525 Length:183 Species:Xenopus tropicalis


Alignment Length:105 Identity:38/105 - (36%)
Similarity:63/105 - (60%) Gaps:1/105 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLK 92
            |.::...|.:::. |::..::||.|.....:.:.||...|||:..|.:||||||..|.:||::|:
 Frog    53 DHDDLLNFKLVIC-PDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILR 116

  Fly    93 DKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVN 132
            :.|.|.|.|.:|:..:|.|...|||:|||..:.||:.:.|
 Frog   117 EDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 38/105 (36%)
ube2mNP_988956.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
UBCc_UBE2F_UBE2M 29..166 CDD:467414 38/105 (36%)
Blue background indicates that the domain is not in the aligned region.

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