DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and Ube2d1

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_017457176.1 Gene:Ube2d1 / 361831 RGDID:1307886 Length:194 Species:Rattus norvegicus


Alignment Length:141 Identity:66/141 - (46%)
Similarity:95/141 - (67%) Gaps:0/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFIT 73
            :.|...|.::|....:|.|..::..::...:.||.||.::||||.|.:..|.|||...||:.|.|
  Rat    54 VMELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTT 118

  Fly    74 KIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIR 138
            |||||||:..|.||||:|:.:|||||.:..:||||.:||..|||||||..|:|:::|.::.:..|
  Rat   119 KIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 183

  Fly   139 NAREWTQKYAV 149
            :|||||||||:
  Rat   184 HAREWTQKYAM 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 65/139 (47%)
Ube2d1XP_017457176.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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