DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and Ube2d1

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001102000.1 Gene:Ube2d1 / 361831 RGDID:1307886 Length:147 Species:Rattus norvegicus


Alignment Length:144 Identity:69/144 - (47%)
Similarity:98/144 - (68%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVR 70
            :||.||...|.::|....:|.|..::..::...:.||.||.::||||.|.:..|.|||...||:.
  Rat     4 KRIQKELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIA 68

  Fly    71 FITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAE 135
            |.||||||||:..|.||||:|:.:|||||.:..:||||.:||..|||||||..|:|:::|.::.:
  Rat    69 FTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEK 133

  Fly   136 AIRNAREWTQKYAV 149
            ..|:|||||||||:
  Rat   134 YNRHAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 66/140 (47%)
Ube2d1NP_001102000.1 UBCc_UBE2D 3..145 CDD:467412 66/140 (47%)

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