DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and Ube2t

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001101814.2 Gene:Ube2t / 360847 RGDID:1310816 Length:204 Species:Rattus norvegicus


Alignment Length:146 Identity:63/146 - (43%)
Similarity:92/146 - (63%) Gaps:4/146 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRF 71
            |:.||...|..||.||:....:::........:.|..::|:|.|:|.||:.:||.||...|::||
  Rat     6 RLKKELHMLAIEPPPGVTCWQEKDKMDNLRAQILGGANTPYEKGIFTLEVIVPERYPFEPPQIRF 70

  Fly    72 ITKIYHPNIDRLGRICLDVL----KDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVN 132
            :|.|||||||..||||||:|    |..|.|:|.|.|:|.|||.|::.|||||||..|::..:|.|
  Rat    71 LTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYN 135

  Fly   133 EAEAIRNAREWTQKYA 148
            :...::.||:||:.:|
  Rat   136 KIAFVKKARQWTETHA 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 62/143 (43%)
Ube2tNP_001101814.2 UBCc_UBE2T 5..150 CDD:467425 62/143 (43%)

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