DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2d2l

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_956246.1 Gene:ube2d2l / 335444 ZFINID:ZDB-GENE-030131-7384 Length:147 Species:Danio rerio


Alignment Length:144 Identity:71/144 - (49%)
Similarity:97/144 - (67%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVR 70
            :||.||...|.::|....:|.|..::..::...:.||||||::||||.|.:..|.|||...|||.
Zfish     4 KRIHKELTDLGRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVA 68

  Fly    71 FITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAE 135
            |.|:||||||:..|.||||:|:.:|||||.|..:||||.:||..|||||||..::|.::|.:..:
Zfish    69 FTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDNEK 133

  Fly   136 AIRNAREWTQKYAV 149
            ..|.|||||||||:
Zfish   134 YNRIAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 68/140 (49%)
ube2d2lNP_956246.1 UBCc_UBE2D 3..145 CDD:467412 68/140 (49%)

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