DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and lwr

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001259833.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster


Alignment Length:159 Identity:49/159 - (30%)
Similarity:81/159 - (50%) Gaps:8/159 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLPRRIIKETQRLMQEPVP-GINAIPDEN-----NARYFHVIVTGPNDSPFEGGVFKLELFLP 59
            ||.:....:.|.::..::..| |..|.|.:|     |...:...:.|...:|:|||::||.:...
  Fly     1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFK 65

  Fly    60 EDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDK--WSPALQIRTILLSIQALLSAPNPDDPLA 122
            :|||.|.||.:|...::|||:...|.:||.:|.::  |.||:.|:.|||.||.||:.||..||..
  Fly    66 DDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQ 130

  Fly   123 NDVAELWKVNEAEAIRNAREWTQKYAVED 151
            .:...::..|..|..:..|...:..|..:
  Fly   131 AEAYTIYCQNRLEYEKRVRAQARAMAATE 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 46/153 (30%)
lwrNP_001259833.1 UQ_con 8..152 CDD:395127 46/143 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438117
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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