DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and lwr

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_476978.1 Gene:lwr / 33226 FlyBaseID:FBgn0010602 Length:159 Species:Drosophila melanogaster


Alignment Length:159 Identity:49/159 - (30%)
Similarity:81/159 - (50%) Gaps:8/159 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLPRRIIKETQRLMQEPVP-GINAIPDEN-----NARYFHVIVTGPNDSPFEGGVFKLELFLP 59
            ||.:....:.|.::..::..| |..|.|.:|     |...:...:.|...:|:|||::||.:...
  Fly     1 MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECAIPGKKSTPWEGGLYKLRMIFK 65

  Fly    60 EDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDK--WSPALQIRTILLSIQALLSAPNPDDPLA 122
            :|||.|.||.:|...::|||:...|.:||.:|.::  |.||:.|:.|||.||.||:.||..||..
  Fly    66 DDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNIKDPAQ 130

  Fly   123 NDVAELWKVNEAEAIRNAREWTQKYAVED 151
            .:...::..|..|..:..|...:..|..:
  Fly   131 AEAYTIYCQNRLEYEKRVRAQARAMAATE 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 46/150 (31%)
lwrNP_476978.1 UBCc_UBE2I 4..155 CDD:467418 46/150 (31%)

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