DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2l3b

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001076266.2 Gene:ube2l3b / 321943 ZFINID:ZDB-GENE-030131-662 Length:190 Species:Danio rerio


Alignment Length:121 Identity:45/121 - (37%)
Similarity:77/121 - (63%) Gaps:2/121 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLK 92
            ||:|...:..::. |::.|::.|.|::|:..|.:||...||:.|.|||||||||..|::||.|:.
Zfish    64 DESNILTWQGLIV-PDNPPYDKGAFRIEIIFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVIS 127

  Fly    93 -DKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKY 147
             :.|.||.:...::.|:.||::.|.|:.||..|:||.:..:..:..:||.|:|:|:
Zfish   128 AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFFKNAEEFTKKH 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 44/119 (37%)
ube2l3bNP_001076266.2 None

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