DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2l3b

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001076266.1 Gene:ube2l3b / 321943 ZFINID:ZDB-GENE-030131-662 Length:190 Species:Danio rerio


Alignment Length:121 Identity:45/121 - (37%)
Similarity:77/121 - (63%) Gaps:2/121 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLK 92
            ||:|...:..::. |::.|::.|.|::|:..|.:||...||:.|.|||||||||..|::||.|:.
Zfish    64 DESNILTWQGLIV-PDNPPYDKGAFRIEIIFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVIS 127

  Fly    93 -DKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKY 147
             :.|.||.:...::.|:.||::.|.|:.||..|:||.:..:..:..:||.|:|:|:
Zfish   128 AENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFFKNAEEFTKKH 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 45/121 (37%)
ube2l3bNP_001076266.1 COG5078 44..186 CDD:227410 45/121 (37%)
UBCc 46..185 CDD:214562 45/121 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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