DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2d3

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_005156599.1 Gene:ube2d3 / 321832 ZFINID:ZDB-GENE-030131-551 Length:148 Species:Danio rerio


Alignment Length:144 Identity:68/144 - (47%)
Similarity:97/144 - (67%) Gaps:0/144 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVR 70
            :||.||...|.::|....:|.|..::..::...:.|||:||::||||.|.:..|.|||...|||.
Zfish     4 KRIQKELTDLARDPPAQCSAGPVGDDVFHWQATIMGPNESPYQGGVFFLTIHFPTDYPFKPPKVA 68

  Fly    71 FITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAE 135
            |.|:||||||:..|.||||:|:.:|||||.|..:||||.:||..|||||||..::|.::|.:..:
Zfish    69 FTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDTEK 133

  Fly   136 AIRNAREWTQKYAV 149
            ..|.|:|||:|||:
Zfish   134 YNRMAKEWTEKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 65/140 (46%)
ube2d3XP_005156599.1 UBCc_UBE2D 3..145 CDD:467412 65/140 (46%)

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