DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ben and ube2e3

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_957215.2 Gene:ube2e3 / 321689 ZFINID:ZDB-GENE-030131-408 Length:209 Species:Danio rerio


Alignment Length:148 Identity:69/148 - (46%)
Similarity:91/148 - (61%) Gaps:0/148 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMS 65
            :||..:||.||...:..:|.|..:|.|..:|...:...:.||..|.:|||||.|::....|||..
Zfish    61 LSSSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFK 125

  Fly    66 APKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWK 130
            .|||.|.|:|||.||:..|.||||:|||.|||||.|..:||||.:||:..||.|||...:|..:.
Zfish   126 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYL 190

  Fly   131 VNEAEAIRNAREWTQKYA 148
            .|.||..|.||:||::||
Zfish   191 TNRAEHDRIARQWTKRYA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 65/142 (46%)
ube2e3NP_957215.2 UBCc_UBE2E 66..206 CDD:467413 65/139 (47%)

Return to query results.
Submit another query.