DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ben and CG2924

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001284819.1 Gene:CG2924 / 31214 FlyBaseID:FBgn0023528 Length:397 Species:Drosophila melanogaster


Alignment Length:136 Identity:34/136 - (25%)
Similarity:49/136 - (36%) Gaps:40/136 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IKETQRLMQE---------------PVPGINAIPDENNARYFHVIVTGPNDSPFEGGV------- 51
            ::.|.|||:|               .:..:|....|.|.|...|    ..|||....:       
  Fly   221 VQATDRLMKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSV----DPDSPLHSDLQMLKEKE 281

  Fly    52 ----FKLELFLPEDYPMSAPKVRFITKIYHPNIDR-----LGRICLDVL-KDKWSPALQIRTILL 106
                ..|.:...|.||...|.||    :.||.|..     .|.||:::| |..||.|..:..:::
  Fly   282 GKDSILLNILFKETYPFEPPFVR----VVHPIISGGYVLIGGAICMELLTKQGWSSAYTVEAVIM 342

  Fly   107 SIQALL 112
            .|.|.|
  Fly   343 QIAATL 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 34/136 (25%)
CG2924NP_001284819.1 UBCc 224..>349 CDD:238117 34/133 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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