DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and Ube2m

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_663553.1 Gene:Ube2m / 22192 MGIID:108278 Length:183 Species:Mus musculus


Alignment Length:127 Identity:40/127 - (31%)
Similarity:70/127 - (55%) Gaps:8/127 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QRLMQEPVPGIN-------AIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVR 70
            |..:|:.:..:|       :..|.::...|.:::. |::..::.|.|.....:.:.||...|||:
Mouse    31 QLRIQKDINELNLPKTCDISFSDPDDLLNFKLVIC-PDEGFYKSGKFVFSFKVGQGYPHDPPKVK 94

  Fly    71 FITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVN 132
            ..|.:||||||..|.:||::|::.|.|.|.|.:|:..:|.|...|||:|||..:.||:.:.|
Mouse    95 CETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 40/127 (31%)
Ube2mNP_663553.1 Interaction with UBA3. /evidence=ECO:0000250 1..57 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
UBCc_UBE2F_UBE2M 29..166 CDD:467414 40/127 (31%)
Blue background indicates that the domain is not in the aligned region.

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