DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ubc-13

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_500272.2 Gene:ubc-13 / 177073 WormBaseID:WBGene00006708 Length:151 Species:Caenorhabditis elegans


Alignment Length:145 Identity:118/145 - (81%)
Similarity:135/145 - (93%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPK 68
            ||||||||||||:.:|||||:|.|||:|||||||::.||:||||.||||||||||||:|||:|||
 Worm     5 LPRRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPK 69

  Fly    69 VRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNE 133
            |||:|||||||||:|||||||:|||||||||||||:|||||||||||||:||||.||||.||.||
 Worm    70 VRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNE 134

  Fly   134 AEAIRNAREWTQKYA 148
            ||||:.|::||..||
 Worm   135 AEAIKTAKQWTMNYA 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 118/145 (81%)
ubc-13NP_500272.2 COG5078 1..149 CDD:227410 116/143 (81%)
UBCc 5..149 CDD:294101 116/143 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159010
Domainoid 1 1.000 245 1.000 Domainoid score I1206
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 257 1.000 Inparanoid score I1942
Isobase 1 0.950 - 0 Normalized mean entropy S62
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1345547at2759
OrthoFinder 1 1.000 - - FOG0002236
OrthoInspector 1 1.000 - - oto19700
orthoMCL 1 0.900 - - OOG6_101934
Panther 1 1.100 - - LDO PTHR24068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1581
SonicParanoid 1 1.000 - - X1478
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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