DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ubc-16

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_493587.1 Gene:ubc-16 / 173354 WormBaseID:WBGene00006711 Length:152 Species:Caenorhabditis elegans


Alignment Length:113 Identity:38/113 - (33%)
Similarity:64/113 - (56%) Gaps:4/113 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RRIIKETQRLMQEPVPG--INAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPK 68
            ||::||..:|..|...|  ::.....|:.:.:.:.|.|...:.:.|.||.|:......||.::|:
 Worm     7 RRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFNSPE 71

  Fly    69 VRFI--TKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSA 114
            |.|:  |...||:|...|.|||.:|.|.|:|||.::::.|||.::||:
 Worm    72 VMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLSS 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 38/113 (34%)
ubc-16NP_493587.1 UQ_con 8..>110 CDD:365926 32/101 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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