DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ben and C28G1.10

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001257066.1 Gene:C28G1.10 / 13222010 WormBaseID:WBGene00219376 Length:203 Species:Caenorhabditis elegans


Alignment Length:153 Identity:49/153 - (32%)
Similarity:82/153 - (53%) Gaps:5/153 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLPRRIIKETQR---LMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDY 62
            ||:..:|:..|.:.   .:.....||.....|.|..:...|:.|..::|:|||:|:|::.:.|.|
 Worm     1 MSTASKRVTNELRNYYSCVSSVDTGIRIKVIEGNIMHLKGIIKGVEETPYEGGIFELDIKIGESY 65

  Fly    63 PMSAPKVRFITKIYHPNIDRL-GRICL-DVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDV 125
            |..||.|:|||||:||::... |.||| ||....|..::.|..:|:.||:.:|..|..:|:..::
 Worm    66 PFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEI 130

  Fly   126 AELWKVNEAEAIRNAREWTQKYA 148
            .|....|.....:.|..||:::|
 Worm   131 LEQATNNREVFEKTAEFWTKRFA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 47/151 (31%)
C28G1.10NP_001257066.1 UBCc 5..149 CDD:238117 44/143 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.