DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and ube2d4

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_012814892.1 Gene:ube2d4 / 100497147 XenbaseID:XB-GENE-962537 Length:159 Species:Xenopus tropicalis


Alignment Length:153 Identity:72/153 - (47%)
Similarity:96/153 - (62%) Gaps:4/153 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLPR----RIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPED 61
            :||.|.    .:..|...|.::|....:|.|...:..::...:.|||||||:||||.|.:..|.|
 Frog     7 LSSFPTFINYSLSVELMDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTD 71

  Fly    62 YPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVA 126
            ||...|||.|.||||||||:..|.||||:|:.:|||||.:..:||||.:||..|||||||..::|
 Frog    72 YPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIA 136

  Fly   127 ELWKVNEAEAIRNAREWTQKYAV 149
            ..:|.:..:..|.|||||||||:
 Frog   137 HTYKADREKYNRLAREWTQKYAM 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 67/146 (46%)
ube2d4XP_012814892.1 UBCc_UBE2D 21..157 CDD:467412 66/135 (49%)

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