DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and Ube2e1

DIOPT Version :10

Sequence 1:NP_511150.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_038949665.1 Gene:Ube2e1 / 100366017 RGDID:2324438 Length:310 Species:Rattus norvegicus


Alignment Length:148 Identity:67/148 - (45%)
Similarity:91/148 - (61%) Gaps:0/148 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMS 65
            :|:..:||.||...:..:|.|..:|.|..:|...:...:.||..|.:|||||.|::....:||..
  Rat   162 LSTSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFK 226

  Fly    66 APKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWK 130
            .|||.|.|:|||.||:..|.||||:|||.|||||.|..:||||.:||:..||.|||...:|..:.
  Rat   227 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYM 291

  Fly   131 VNEAEAIRNAREWTQKYA 148
            .|.||..|.||:||::||
  Rat   292 TNRAEHDRMARQWTKRYA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_511150.1 UBCc_UBE2N 4..147 CDD:467433 64/142 (45%)
Ube2e1XP_038949665.1 PHA03378 <19..>108 CDD:223065
UBCc_UBE2E 167..307 CDD:467413 64/139 (46%)
Blue background indicates that the domain is not in the aligned region.

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