DRSC/TRiP Functional Genomics Resources

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Protein Alignment ben and birc6

DIOPT Version :9

Sequence 1:NP_001162752.1 Gene:ben / 32358 FlyBaseID:FBgn0000173 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_031758792.1 Gene:birc6 / 100135722 XenbaseID:XB-GENE-1001894 Length:4834 Species:Xenopus tropicalis


Alignment Length:132 Identity:41/132 - (31%)
Similarity:66/132 - (50%) Gaps:30/132 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QRLMQEPVPGINAIP-----------DENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSA 66
            :||.||.|....::|           ||.......|::|||.|:|:..|.|:.:::.|:|||.|.
 Frog  4553 RRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPNSP 4617

  Fly    67 PKVRFITK-----IYHPNIDRLGRICLDVL-------KDKWSPA----LQIRTILLSIQALLSAP 115
            |.|...|.     .::||:...|::||.:|       ::||:|.    ||   :|:|||:|:...
 Frog  4618 PLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQ---VLVSIQSLILVS 4679

  Fly   116 NP 117
            .|
 Frog  4680 EP 4681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
benNP_001162752.1 UBCc 3..149 CDD:412187 41/132 (31%)
birc6XP_031758792.1 BIR 240..313 CDD:237989
BIRC6 3442..3597 CDD:403536
UBCc 4574..4686 CDD:238117 35/111 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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