DRSC/TRiP Functional Genomics Resources

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Protein Alignment mamo and SP3

DIOPT Version :9

Sequence 1:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster
Sequence 2:NP_003102.1 Gene:SP3 / 6670 HGNCID:11208 Length:781 Species:Homo sapiens


Alignment Length:860 Identity:177/860 - (20%)
Similarity:284/860 - (33%) Gaps:314/860 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   857 TQYNKHAQQPQQPQTGGATGSGVGGLGGSPTAGASFNLRYPTPTAFYQQQQQQGKGA-------- 913
            |...|..:|.:.......:|.|.||.||.              ..:.|||||.|.||        
Human     2 TAPEKPVKQEEMAALDVDSGGGGGGGGGH--------------GEYLQQQQQHGNGAVAAAAAAQ 52

  Fly   914 KSSPSPQQMATSSTTVMSNDS-GEDSCKRSSADSDEVTIMELPSERSAQLYKESLEQLLQRQRRT 977
            .:.|||..:..::.:.:...| |:|..:.::|                                 
Human    53 DTQPSPLALLAATCSKIGPPSPGDDEEEAAAA--------------------------------- 84

  Fly   978 PILAGSGSGSGSGTGSGSVIVDAAGLRQYTQLLLAGAGSGGASDLKEKSSSSSTSSTPPLLTQQL 1042
               ||:.:.:|: ||.                 ||.|..|||.:..|     ..|:||..:..:.
Human    85 ---AGAPAAAGA-TGD-----------------LASAQLGGAPNRWE-----VLSATPTTIKDEA 123

  Fly  1043 SQMLKSPSDTCSS--------------LFSSSGGGTGSTGPGITGETIEEETRCVVCNAHFPNVW 1093
            ..:::.||...||              :||.:.|...|.|   |..:::.:.        .|.: 
Human   124 GNLVQIPSAATSSGQYVLPLQNLQNQQIFSVAPGSDSSNG---TVSSVQYQV--------IPQI- 176

  Fly  1094 LLEQHAALQHPHVGPGEEKPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDVCGMQFRY 1158
               |.|..|...:|               :...|......:::.:.::         :.|.....
Human   177 ---QSADGQQVQIG---------------FTGSSDNGGINQESSQIQI---------IPGSNQTL 214

  Fly  1159 LKSFKKHRLNHALERLHGKKSVGV---IGRLG-----GSGSGPSSSAISVSVAAPTSVSASGSVT 1215
            |.|              |..|..:   |.:.|     |...|.||......|.|...:...|::|
Human   215 LAS--------------GTPSANIQNLIPQTGQVQVQGVAIGGSSFPGQTQVVANVPLGLPGNIT 265

  Fly  1216 -----SVDQDVVTSSQEPMLADEGEDLRVNVKREGTA------DEQSAESRANDLEEHEQDN--- 1266
                 |||.|.:..|........|.:...::...|.|      .|::.|..:.|:.|...|.   
Human   266 FVPINSVDLDSLGLSGSSQTMTAGINADGHLINTGQAMDSSDNSERTGERVSPDINETNTDTDLF 330

  Fly  1267 -----------TVDSAGITMLYQDNNSSASASTSATEPNISSSDG--IHS-TNKRSRLHHLETDP 1317
                       |:||.||  |.|:.|   |.:||:.:.:.|...|  |.| .::.::..:::...
Human   331 VPTSSSSQLPVTIDSTGI--LQQNTN---SLTTSSGQVHSSDLQGNYIQSPVSEETQAQNIQVST 390

  Fly  1318 SYPHHHHHHHHHHHQQQHHQAQHQHHNPQSQLPTHLGHVSLPLVATSAAGSSSSAAAAAVVAAAQ 1382
            :.|           ..||.|.| :...|.||.....|.....:....|:|.:.|..|   :...|
Human   391 AQP-----------VVQHLQLQ-ESQQPTSQAQIVQGITPQTIHGVQASGQNISQQA---LQNLQ 440

  Fly  1383 AQVSSG--------ATGSGATG------SGAPGSGNVG-----------------SAGSSGAGGG 1416
            .|::.|        .|.||...      .|.....|:.                 :.|...||| 
Human   441 LQLNPGTFLIQAQTVTPSGQVTWQTFQVQGVQNLQNLQIQNTAAQQITLTPVQTLTLGQVAAGG- 504

  Fly  1417 ISSLSSLTSLINAERIPNEQFLGLN-----------------------------PQEASI----- 1447
              :.:|....::..::||.|.:.:|                             |:|..:     
Human   505 --AFTSTPVSLSTGQLPNLQTVTVNSIDSAGIQLHPGENADSPADIRIKEEEPDPEEWQLSGDST 567

  Fly  1448 -----LNFLRVDAAERQRDKR----PATSRFAC-------------------------PFCGKCV 1478
                 |..|||...:.:.|::    ....|.||                         |.|||..
Human   568 LNTNDLTHLRVQVVDEEGDQQHQEGKRLRRVACTCPNCKEGGGRGTNLGKKKQHICHIPGCGKVY 632

  Fly  1479 RSKENLKLHVRKHTGERPFVC--LFCGRAFGGKSDLTRHLRIHTGERPYHCESCGKCFARADYLS 1541
            ....:|:.|:|.|:|||||||  ::||:.|....:|.||.|.||||:.:.|..|.|.|.|:|:|:
Human   633 GKTSHLRAHLRWHSGERPFVCNWMYCGKRFTRSDELQRHRRTHTGEKKFVCPECSKRFMRSDHLA 697

  Fly  1542 KHLTTH-----IHNA 1551
            ||:.||     ||::
Human   698 KHIKTHQNKKGIHSS 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamoNP_572932.2 BTB 21..118 CDD:279045
BTB 32..118 CDD:197585
C2H2 Zn finger 1082..1105 CDD:275368 4/22 (18%)
C2H2 Zn finger 1116..1137 CDD:275368 1/20 (5%)
C2H2 Zn finger 1149..1169 CDD:275368 3/19 (16%)
zf-C2H2 1469..1491 CDD:278523 9/46 (20%)
C2H2 Zn finger 1471..1491 CDD:275368 8/44 (18%)
zf-H2C2_2 1483..1506 CDD:290200 13/24 (54%)
C2H2 Zn finger 1499..1519 CDD:275368 8/21 (38%)
zf-H2C2_2 1511..1536 CDD:290200 12/24 (50%)
C2H2 Zn finger 1527..1547 CDD:275368 9/19 (47%)
SP3NP_003102.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53 17/64 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..88 6/58 (10%)
Transactivation domain (Gln-rich) 138..237 19/151 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..338 6/36 (17%)
Transactivation domain (Gln-rich) 350..499 30/166 (18%)
9aaTAD. /evidence=ECO:0000269|PubMed:31375868 461..469 0/7 (0%)
Repressor domain 534..620 10/85 (12%)
C2H2 Zn finger 623..645 CDD:275368 7/21 (33%)
COG5048 <636..718 CDD:227381 35/77 (45%)
zf-H2C2_2 637..664 CDD:290200 14/26 (54%)
C2H2 Zn finger 653..675 CDD:275368 8/21 (38%)
zf-H2C2_2 667..690 CDD:290200 11/22 (50%)
zf-C2H2 681..703 CDD:278523 9/21 (43%)
C2H2 Zn finger 683..703 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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