DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mamo and CG34376

DIOPT Version :9

Sequence 1:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster
Sequence 2:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster


Alignment Length:1117 Identity:223/1117 - (19%)
Similarity:333/1117 - (29%) Gaps:485/1117 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHPEGH 68
            :.:.|.|.|:|.|:...|..|...|.||||||.| :|..:.|||:||:.||.|||.:|..:|..|
  Fly     3 DEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLAC-DGKLLHAHKIVLAICSPYFQEIFTTNPCKH 66

  Fly    69 LIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMTNQNTTLREPEREPD 133
            .|:|||||.|..:..|:||||:|.|||::.:|.:.:|..:.|::||||  ||.|:          
  Fly    67 PIIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLA--TNSNS---------- 119

  Fly   134 RLRPQGGGGSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTSTSATSAAATAAATAAT 198
                               ||.:::...:::|                                 
  Fly   120 -------------------SPGSSVSEKSSSQ--------------------------------- 132

  Fly   199 SASTTATAAAGSSNTTTTTAATTTATCATAATSTAATSSSSSVTSAAAAAAAAASASGVAHSE-- 261
                  ..|..||||.:|....         :||.:.::|.|.|.               |:|  
  Fly   133 ------PPAEESSNTNSTNHHN---------SSTNSNNNSKSETD---------------HNESK 167

  Fly   262 -EATSSSSSTGGQKREASDRSSPTPAKRSSRMHPADKVDVAEDREQEQNQADELLSEELLGRNLK 325
             ::.|.::|.||..|.::|         :|.::.::|                            
  Fly   168 GQSNSRTTSPGGASRASND---------ASHLYTSNK---------------------------- 195

  Fly   326 DEEDDDVDELDENEETKLRGRDEDDDDEDEEEDTPMPLDLYQRPNVEPKSAAAATAAQQGGSNSL 390
                                             .|||.|.                    ||:||
  Fly   196 ---------------------------------RPMPSDF--------------------GSDSL 207

  Fly   391 SGSSNACHTNSSSNSNNNNNNNNNSSSNNNNNTSSGK---TSASSNGGTASSGGTADSVVAVDDD 452
            |                               ..|||   .|...:|...|.||           
  Fly   208 S-------------------------------IYSGKQLRRSLKDHGSGGSEGG----------- 230

  Fly   453 DDDDDGGHHHQRQVMDDRLEQDVDEEDLDDDVVVVGPATAMARGIAQRLAHQNLQRLHHTHHHAQ 517
                 ||.|.....   .|:..::.|:.     .:.|...:..| .||.....|:|....|||. 
  Fly   231 -----GGDHADTAA---GLDNSMNSEEF-----FLPPIPQITMG-EQRYDLGGLKRESDGHHHG- 280

  Fly   518 HQHSQHHHPHSQHHHTPHHQQHHTHSDDEDAMPVIAKSEILDDDYDDEMDLEDDDEADNSSNDLG 582
                    |.|............|.|    |.|   .:.|.:....:.||..:..:..|||...|
  Fly   281 --------PLSAGGGNSGSVGSLTSS----ASP---SAPIRNPFAPNFMDSFNYYKGGNSSGPSG 330

  Fly   583 -LNMKMGSGGAGGGGGVDLSTGSTLIPSPL-------------ITLPSSSAAAAAAAAAAM---- 629
             .|..:|.||....|.|.|.:|:. .|:.|             :.:|||.:.....:..::    
  Fly   331 SSNNSVGPGGVNNNGSVGLGSGAE-YPNELYMPNDYSKSFANHMDIPSSGSNMVMLSTTSLLHGN 394

  Fly   630 --ESQRSTPAMSAAQAAGAGASDLSIGGCGGRPASRSSR----DGGGND-----GGRGGASSSSL 683
              .::.:|.|...............|..|..|..:...|    .|..|.     ||:|.::.|:.
  Fly   395 CVFNRNNTVATQQGMKTYWLCKSYRISMCRARCITHLGRIISATGVHNHTPHMRGGQGSSAPSTA 459

  Fly   684 LSPGTVANLLPVQSVPLSLKKEIDCSEDDNSSHSRHMQQRSASAGGGLGGDLDYRASHESLLRNF 748
            ...|..|        |..:..:...|..|              .||.||.||    .|.:.:.| 
  Fly   460 SVSGNPA--------PTPISSQAGYSLTD--------------GGGHLGPDL----QHGNRVTN- 497

  Fly   749 SSPMSAMAASRCPTPFAFPFSPLGLSLFDIDPSRILSLLHHQTWLAEEALRTRGLLTAPKDFPHR 813
                  |.|::.|.|   |..|        .|..:.|..||                     ||.
  Fly   498 ------MFANQTPPP---PPPP--------PPLPVASTPHH---------------------PHH 524

  Fly   814 FTTLSDLLTKDYQPGAGQPMVTATATATTASSTSQVSASRSGDTQYNKHAQQPQQPQTGGATGSG 878
            ...|            |||:.....                      :|...|...:..|::.| 
  Fly   525 HHHL------------GQPLPNLLV----------------------QHHPAPSHMEQHGSSAS- 554

  Fly   879 VGGLGGSPTAGASFNLRY-PTPTAFYQQQQQQGKGAKSSPSPQQMATSSTTVMSNDSGEDSCKRS 942
               |..:|      ||.: .|||..:|||..|.....:.|.|||                     
  Fly   555 ---LLHNP------NLMHLQTPTHHHQQQHHQQHSPHNPPPPQQ--------------------- 589

  Fly   943 SADSDEVTIMELPSERSAQLYKESLEQLLQRQRRTPILAGSGSGSGSGTGSGSVIVDAAGLRQYT 1007
                                  .:||                  .|.|:|||:|::..|.|:|..
  Fly   590 ----------------------HNLE------------------LGGGSGSGAVLLSPAHLQQSP 614

  Fly  1008 QLLLAGAGSGGASDLKEKSSSSSTSSTPP---LLTQQLSQMLKSPSDTCSSLFSSSGGGTGSTGP 1069
            |              ..:||.|..:.:||   :..||..|..:...:..::..::.    .||..
  Fly   615 Q--------------SNRSSHSLQAQSPPPQSVEEQQPHQQQQQQQEGATTEVTTD----PSTAH 661

  Fly  1070 GITGETIEEETR 1081
            .|...||...||
  Fly   662 VINSITISPNTR 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamoNP_572932.2 BTB 21..118 CDD:279045 47/96 (49%)
BTB 32..118 CDD:197585 42/85 (49%)
C2H2 Zn finger 1082..1105 CDD:275368 223/1117 (20%)
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
CG34376NP_732741.1 BTB 20..113 CDD:279045 44/93 (47%)
BTB 31..115 CDD:197585 42/86 (49%)
FLYWCH 390..443 CDD:282369 7/52 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451880
Domainoid 1 1.000 69 1.000 Domainoid score I9606
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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