DRSC/TRiP Functional Genomics Resources

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Protein Alignment mamo and fru

DIOPT Version :9

Sequence 1:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster
Sequence 2:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster


Alignment Length:1245 Identity:281/1245 - (22%)
Similarity:406/1245 - (32%) Gaps:484/1245 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEHPEGH 68
            :.:||||||:.:||.||.:.|||..:|.||||.| ||.:::||:.:|||||.||:::||::...|
  Fly   109 QQFCLRWNNHPTNLTGVLTSLLQREALCDVTLAC-EGETVKAHQTILSACSPYFETIFLQNQHPH 172

  Fly    69 LIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMTNQNTTLREPEREPD 133
            .|:.|||||::|:::|::|||||||||....|...|||||||:|:||.:  |.|...|.   :.|
  Fly   173 PIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTD--NNNLNYRS---DCD 232

  Fly   134 RLR------PQGGG-----GSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTSTSATS 187
            :||      |.|.|     |..|.|...||:...:.|:..:..........|..:::|.|..:::
  Fly   233 KLRDSAASSPTGRGPSNYTGGLGGAGGVADAMRESRDSLRSRCERDLRDELTQRSSSSMSERSSA 297

  Fly   188 AAATAAATAATSASTTATAAAGSSNTTTTTAATTTATCATAATSTAATSSSSSVTSAAAAAAAAA 252
            |||.|||.||.:      ||.|:.|........||.|         ....|.||.||:|||||||
  Fly   298 AAAAAAAAAAVA------AAGGNVNAAAVALGLTTPT---------GGERSPSVGSASAAAAAAA 347

  Fly   253 SASGVAHSEEATSSSSSTGGQKREASDRSSPTPAKRSSRMHPADKVDVAEDREQEQNQADELLSE 317
            .|:.||   .|.:.|:|..|    .|||.|.                                  
  Fly   348 VAAAVA---AAANRSASADG----CSDRGSE---------------------------------- 371

  Fly   318 ELLGRNLKDEEDDDVDELDENEETKLRGRDEDDDDEDEEEDTPMPLDLYQRPNVEPKSAAAATAA 382
                                      ||..|..|..|         ||.|...            
  Fly   372 --------------------------RGTLERTDSRD---------DLLQLDY------------ 389

  Fly   383 QQGGSNSLSGSSNACHTNSSSNSNNNNNNNNNSSSNNNNNTSSGKTSASSNGGTASSGGTADSVV 447
                ||..:.:||:  :::..|:||||||||||||||||        :|||....:||       
  Fly   390 ----SNKDNNNSNS--SSTGGNNNNNNNNNNNSSSNNNN--------SSSNRERNNSG------- 433

  Fly   448 AVDDDDDDDDGGHHHQRQVMDDRLEQDVDEEDLDDDVVVVGPATAMARGIAQRLAHQNLQRLHHT 512
                         ..:|:...:| |:|.|.|                      |:...:::|..:
  Fly   434 -------------ERERERERER-ERDRDRE----------------------LSTTPVEQLSSS 462

  Fly   513 HHHAQHQHSQHHHPHSQHHHTPHHQQHHTHSDDEDAMPVIAKSEILDDDYDDEMDLEDDDEADNS 577
            ....::..|...:..|..|...|:.|....:.....:|....|           ..|.:|.....
  Fly   463 KRRRKNSSSNCDNSLSSSHQDRHYPQDSQANFKSSPVPKTGGS-----------TSESEDAGGRH 516

  Fly   578 SNDLGLNMKMGSGGAGGGGGV---------DLSTGSTLIPSPL--------ITLPSSSAAAAAAA 625
            .:.|.:...:..||.||..|.         .||....|:.:..        :.||.....:||..
  Fly   517 DSPLSMTTSVHLGGGGGNVGAASALSGLSQSLSIKQELMDAQQQQQHREHHVALPPDYLPSAALK 581

  Fly   626 AAAMESQRSTPAMSAAQAAGA-----GASDLSI---GGCGGR-----------PASRSSRDGGGN 671
            ..| |...:.....|.|||.|     .|..|.:   ....||           |.....|:...:
  Fly   582 LHA-EDMSTLLTQHALQAADARDEHNDAKQLQLDQTDNIDGRVKCFNIKHDRHPDRELDRNHREH 645

  Fly   672 DGGRGGASSSSLLSPGTVANLLPVQSVPLSLKKEIDCSE-DDNSSHSRHMQQRSA---------- 725
            |.           .||.:..::......:....|.|..| .:.:.|:...:.|.|          
  Fly   646 DD-----------DPGVIEEVVVDHVREMEAGNEHDPEEMKEAAYHATPPKYRRAVVYAPPHPDE 699

  Fly   726 SAGGGLGGDL----DYRASHESLLRNFSSPMSAMAASRCPTPFAFPFSPLGLSLFDIDPSRILSL 786
            .|..|.|.|:    .|...::....|       |.|.||                    ||...:
  Fly   700 EAASGSGSDIYVDGGYNCEYKCKELN-------MRAIRC--------------------SRQQHM 737

  Fly   787 LHHQTWLAEEALRTRGLLTAPKDFPHRFTTLSDLLTKDYQPGAGQPMVTATATATTASSTSQVSA 851
            :.|.:                ...||..:.:.......|.|    |:....|...:..:..|:..
  Fly   738 MSHYS----------------PHHPHHRSLIDCPAEAAYSP----PVANNQAYLASNGAVQQLDL 782

  Fly   852 SRSGDTQYNKHA--QQPQQPQTGGATGSGVGGLGGSPTAGASFNLRYPTPTAFYQQQQQQGKGAK 914
            |     .|:.||  |..|.|                             |:|.:....|      
  Fly   783 S-----TYHGHANHQLHQHP-----------------------------PSATHPSHSQ------ 807

  Fly   915 SSPSPQQMATSSTTVMSNDSGEDSCKRSSADSDEVTIMELPSERSAQLYKESLEQLLQRQRRTPI 979
            |||                                   ..|                        
  Fly   808 SSP-----------------------------------HYP------------------------ 813

  Fly   980 LAGSGSGSGSGTGSGSVIVDAAGLRQYTQLLLAGAGSGGASDLKEKSSSSSTSSTPPLLTQQLSQ 1044
                 |.||:|.|:|||.|.           :||:.||.|:......::|:.|..|         
  Fly   814 -----SASGAGAGAGSVSVS-----------IAGSASGSATSAPASVATSAVSPQP--------- 853

  Fly  1045 MLKSPSDTCSSLFSSSGGGTGSTGPGITGETIEEET-------------RCVVCNAHFPNVWLLE 1096
               |.|.|.|:..:::.....:.........|:..|             |||.||....|.|   
  Fly   854 ---SSSSTGSTSSAAAVAAAAAAAANRRDHNIDYSTLFVQLSGTLPTLYRCVSCNKIVSNRW--- 912

  Fly  1097 QHAALQHPHVGPGEEKPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDVCGMQFRYLKS 1161
            .||.:                              |:.|:|.          |.|||.:|....:
  Fly   913 HHANI------------------------------HRPQSHE----------CPVCGQKFTRRDN 937

  Fly  1162 FKKH-RLNHA 1170
            .|.| ::.||
  Fly   938 MKAHCKIKHA 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamoNP_572932.2 BTB 21..118 CDD:279045 51/96 (53%)
BTB 32..118 CDD:197585 47/85 (55%)
C2H2 Zn finger 1082..1105 CDD:275368 8/22 (36%)
C2H2 Zn finger 1116..1137 CDD:275368 2/20 (10%)
C2H2 Zn finger 1149..1169 CDD:275368 7/20 (35%)
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
fruNP_001163648.1 BTB 126..221 CDD:279045 51/95 (54%)
BTB 137..221 CDD:197585 47/84 (56%)
C2H2 Zn finger 901..918 CDD:275368 8/49 (16%)
C2H2 Zn finger 925..944 CDD:275368 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451879
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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