DRSC/TRiP Functional Genomics Resources

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Protein Alignment mamo and CG3726

DIOPT Version :9

Sequence 1:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster
Sequence 2:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster


Alignment Length:599 Identity:151/599 - (25%)
Similarity:226/599 - (37%) Gaps:153/599 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEH-PEG 67
            :.|||||..:.|||..:|||||..|...||||.| ||..||||:|||.|||::|.::...: .|.
  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLAC-EGQLIRAHRVVLCACSTFFDAVLSNYASER 67

  Fly    68 HLIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMT------------- 119
            ..|:|:|||.|||::.|:|||||||:||::..|.:|||||:.||:|||||:|             
  Fly    68 DPIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMA 132

  Fly   120 --------------------------------------NQNTTL------REPEREPDRLRPQGG 140
                                                  :.:..|      ||.||:.:||.|...
  Fly   133 AAEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPGME 197

  Fly   141 G------------GSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTSTSATSAAATAA 193
            |            |:.|||...:.|...:|:..|..:................:....:....|.
  Fly   198 GVLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQ 262

  Fly   194 ATAATSASTTATAAAGSSNTTTTTAATTTATCATAATSTAATSSSSSVTSAAAAAAAAASASGVA 258
            ..|....:              ..|...||...|.....||.::|   .::..||........:.
  Fly   263 YAANLEPA--------------QRAYLETARHFTEEPPLAAHAAS---MASPPAACPPKQRQRLR 310

  Fly   259 HSEEATSSSSSTGGQKREASDRSSPTPAKRSSRMHPADK-----VDVAEDREQEQNQADELLSEE 318
            |.::.......:     |:||:..|...:..|.:.|...     :...:..:||....||.|...
  Fly   311 HQQQQQQQLLQS-----ESSDQEQPAAGQDWSNLEPNGSATPKLLSDGDANKQETEGGDESLPAV 370

  Fly   319 LLGRNLKDEEDDDVDELDENEET--KLR---------GRDEDDDDEDEEEDTPMPLDLYQ----- 367
            |  ..........::::.|..|.  |||         |.||.|..::|.::.|.|::..:     
  Fly   371 L--TTASSSGTKKLEKIGERRERHGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLV 433

  Fly   368 -------RPNVE-PKSAA----AATAAQQGGSNSLSGSSNACHTNSSSNSNNNNNNNNNSSSNNN 420
                   ||.|. |.|.|    ....|..|||.|.:||.:.     .|:...|.:....:.....
  Fly   434 ANRAESPRPTVVIPASFACKYEGGVTAAGGGSGSGTGSGSL-----GSSYLINEHGMLMAHEFAP 493

  Fly   421 NNTSSGKTSA----------------SSNGGTASSG-GTADSVVAVDDDDDDDDGGHHHQRQVMD 468
            |..|:..|:|                :.|||...|| ||..:....|...:|.|..   :.::.:
  Fly   494 NVASAAATAAVAVAAAAAAVANASAGNGNGGQDVSGSGTGAAADYPDIKLEDYDAA---ELRLTN 555

  Fly   469 DRLEQDVDEEDLDD 482
            :.|.|..|...:||
  Fly   556 EELSQWQDVIKMDD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamoNP_572932.2 BTB 21..118 CDD:279045 55/97 (57%)
BTB 32..118 CDD:197585 49/86 (57%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
CG3726NP_001284917.1 BTB 21..118 CDD:279045 55/97 (57%)
BTB 32..121 CDD:197585 51/89 (57%)
HTH_psq 587..622 CDD:283007
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451902
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.030

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