DRSC/TRiP Functional Genomics Resources

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Protein Alignment mamo and Sp1

DIOPT Version :10

Sequence 1:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster
Sequence 2:NP_036787.2 Gene:Sp1 / 24790 RGDID:3738 Length:786 Species:Rattus norvegicus


Alignment Length:839 Identity:168/839 - (20%)
Similarity:257/839 - (30%) Gaps:314/839 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   872 GGATGSGVGGLGGSPTAGASFNLRYPTPTAFYQQQQQQGKGAKSSPSPQQMATSSTTVMSNDSGE 936
            |...|||.||       ||:|:....:.|. .......|.|.:|.|||..:..:           
  Rat    22 GNNGGSGNGG-------GAAFSQTRSSSTG-SSSSSGGGGGQESQPSPLALLAA----------- 67

  Fly   937 DSCKRSSADSDEVTIMELPSERSAQLYKESLEQLLQRQRRTPILAGSGSGSGSGTGSGSVIVDAA 1001
             :|.|          :|.|:|.|                      .:..|.....|:|.:.:.|.
  Rat    68 -TCSR----------IESPNENS----------------------NNSQGPSQSGGTGELDLTAT 99

  Fly  1002 GLRQYT---QLLLAGAGSGGASDLKEKSSSSSTSS--------------------TPPLLTQQLS 1043
            .|.|..   |::  .:.||.....||:|.:|:..|                    ||.|..||:.
  Rat   100 QLSQGANGWQII--SSSSGATPTSKEQSGNSTNGSNGSESSKNRTVSGGQYVVAATPNLQNQQVL 162

  Fly  1044 QMLKS--PS------------DTCSSLFSSSGGGTGSTGPGITGETIEEETRCVVCN-------- 1086
            ..|..  |:            |.....|:::|......|.|.. :.|....:.::.|        
  Rat   163 TGLPGVMPNIQYQVIPQFQTVDGQQLQFAATGAQVQQDGSGQI-QIIPGANQQIITNRGSGGNII 226

  Fly  1087 AHFPNVWLLEQHAALQHPHVGPGEEKPFICEQCGQSYRYRSAYAKHKEQNHRARLPADKLFTCDV 1151
            |..||  ||:|...||                                                 
  Rat   227 AAMPN--LLQQAVPLQ------------------------------------------------- 240

  Fly  1152 CGMQFRYLKSFKKHRLNHALERLHGKKSVGVIGRLGGSGSGPSSSAISVSVAAPTSVSASGSVTS 1216
             |:....|....::..|..: .|:|..::..:..:..:...|||.|        .::|:|||..|
  Rat   241 -GLANNVLSGQTQYVTNVPV-ALNGNITLLPVNSVSAATLTPSSQA--------GTISSSGSQES 295

  Fly  1217 VDQDVVTSSQEPMLADEGEDLRVNVKREGTA--------DEQSAESRANDLEEHEQDNTVDSAGI 1273
            ..|.|.:                     |||        .:.|:.|...:...:....|..:.||
  Rat   296 GSQPVTS---------------------GTAISSASLVSSQASSSSFFTNANSYSTTTTTSNMGI 339

  Fly  1274 TMLYQDNNSSASASTSATEPNISSSDGIHSTNKRSRLHHLETDPSYPHHHHHHHHHHHQQQHHQ- 1337
             |.:..:.||.::|...|...:....|..|.|    :...:|................||...| 
  Rat   340 -MNFTSSGSSGTSSQGQTSQRVGGLQGSDSLN----IQQNQTSGGSLQGSQQKEGEQSQQTQQQQ 399

  Fly  1338 --------------------------------AQHQHHNPQSQLPTHLGHVSLPLVATSAAGSSS 1370
                                            :|....|.|.|...:.|.:   ::.|...|.:.
  Rat   400 ILIQPQLVQGGQALQALQAAPLSGQTFTTQAISQETLQNLQLQAVQNSGPI---IIRTPTVGPNG 461

  Fly  1371 SAA---------------AAAVVAAAQAQVSSGATGSG-------ATGSGAP-GSGNVGSAG-SS 1411
            ..:               |..:..|....||.|.|.|.       |:.:..| |:..|.:|. ||
  Rat   462 QVSWQTLQLQNLQVQNPQAQTITLAPMQGVSLGQTSSSNTTLTPIASAASIPAGTVTVNAAQLSS 526

  Fly  1412 GAGGGISSLSSL-TSLINAERIPNEQFL--------------------GLNPQEASILNFLRVDA 1455
            ..|....:||:| ||.|...::|.....                    |::.:.|.      .:.
  Rat   527 MPGLQTINLSALGTSGIQVHQLPGLPLAIANTPGDHGAQLGLHGPGGDGIHDETAG------GEE 585

  Fly  1456 AERQRDKRPATSR------FACPF------------------------CGKCVRSKENLKLHVRK 1490
            .|...|.:|...|      ..||:                        |||......:|:.|:|.
  Rat   586 GENSPDPQPQAGRRTRREACTCPYCKDSEGRGSGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRW 650

  Fly  1491 HTGERPFVC--LFCGRAFGGKSDLTRHLRIHTGERPYHCESCGKCFARADYLSKHLTTH 1547
            |||||||:|  .:||:.|....:|.||.|.||||:.:.|..|.|.|.|:|:||||:.||
  Rat   651 HTGERPFMCNWSYCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTH 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamoNP_572932.2 BTB_POZ_BAB-like 30..114 CDD:349624
C2H2 Zn finger 1082..1105 CDD:275368 9/30 (30%)
C2H2 Zn finger 1116..1137 CDD:275368 0/20 (0%)
C2H2 Zn finger 1149..1169 CDD:275368 2/19 (11%)
zf-C2H2 1469..1491 CDD:395048 8/45 (18%)
C2H2 Zn finger 1471..1491 CDD:275368 8/43 (19%)
zf-H2C2_2 1483..1506 CDD:463886 13/24 (54%)
C2H2 Zn finger 1499..1519 CDD:275368 8/21 (38%)
zf-H2C2_2 1511..1536 CDD:463886 12/24 (50%)
C2H2 Zn finger 1527..1547 CDD:275368 10/19 (53%)
Sp1NP_036787.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..94 25/123 (20%)
Repressor domain. /evidence=ECO:0000250 2..83 22/112 (20%)
SP1_N 55..628 CDD:411775 119/715 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..143 7/34 (21%)
Transactivation domain A (Gln-rich). /evidence=ECO:0000250 147..252 24/157 (15%)
Transactivation domain B (Gln-rich). /evidence=ECO:0000250 262..496 44/270 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..303 10/50 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..397 14/69 (20%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:P08047 463..471 0/7 (0%)
Transactivation domain C (highly charged). /evidence=ECO:0000250 497..611 24/119 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..600 6/43 (14%)
VZV IE62-binding. /evidence=ECO:0000250 620..786 37/90 (41%)
zf-C2H2 627..651 CDD:395048 6/23 (26%)
C2H2 Zn finger 629..651 CDD:275368 6/21 (29%)
zf-H2C2_2 643..670 CDD:463886 14/26 (54%)
C2H2 Zn finger 659..681 CDD:275368 8/21 (38%)
zf-H2C2_2 673..696 CDD:463886 11/22 (50%)
zf-C2H2 687..709 CDD:395048 10/21 (48%)
C2H2 Zn finger 689..709 CDD:275368 10/19 (53%)
Domain D. /evidence=ECO:0000250 709..786 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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