DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mamo and Btbd18

DIOPT Version :9

Sequence 1:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster
Sequence 2:NP_001138572.1 Gene:Btbd18 / 100270744 MGIID:3650217 Length:723 Species:Mus musculus


Alignment Length:441 Identity:96/441 - (21%)
Similarity:161/441 - (36%) Gaps:89/441 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QDGSLVDVTLVCSEGTSIRAHKVVLSACSSYF-QSLFLEHP-EGHLIVI-LKDVRFAELQTLVEF 87
            |.|...| .|:.:||.::.||..:|||||.:| :.|..|.| :|..:|: :..::...|:.||:|
Mouse    29 QSGVFCD-ALLQAEGEAVPAHCCILSACSPFFTERLERERPVQGRKVVLEMGGLKIQTLRKLVDF 92

  Fly    88 MYKGEVNVQYCQLSALLKTAESLKVKGLAEMTNQ--------------NTTLREPEREP------ 132
            :|..|:.|...:...:|..|..|:|..|..:..:              ...|:.|...|      
Mouse    93 LYTSEMEVSQEEAQDVLSAARQLRVSELETLQLEGGKLVKAPQGRRLNRECLQPPAAAPISARVV 157

  Fly   133 -DRLRPQG-----------GG------GSGGSAHKAADSPAAALDATAATQAATATATATAAAAT 179
             .:.|||.           |.      |....|||..:.|.|  |:.:.||      ....|...
Mouse   158 GPKSRPQTPLPVTQTPSPLGAVRLKSLGEEEGAHKKTNLPNA--DSLSDTQ------LKKKARVC 214

  Fly   180 STSTSATSAAATAAATAATSASTTATAAAGSSNTTTTTAATTTATCATAATST-AATSSSSSVTS 243
            .|..|.:|.::.......|.::...||......:............:.:..|. ..||:.||:.|
Mouse   215 LTQESRSSPSSQREGPKETKSNPGPTALPSLYPSVDEQLLPRKIRLSRSKPSPHVYTSTPSSILS 279

  Fly   244 AAAAAAAAASASGVAHSEEATSSSSSTGGQKREASD----RSSPTPA---------KRSSRMHPA 295
               ..::..:|.|.....:.|.|..:.|..|::..:    :|:|.|:         |:|..:...
Mouse   280 ---GPSSMPTAPGRRLWRQRTVSKEAQGVDKQKPGEVRPLQSTPDPSDVGKPAENKKQSPELRAP 341

  Fly   296 DKVDVAED-------REQEQNQADELLSEELLGRNLKDE----EDDDVDE-----LDENEETKLR 344
            ....|.|.       |:.......|::.|..| ||.:|.    |..||:|     |....|.::.
Mouse   342 TSSSVEEGQVGRVKLRKIVNGTCWEVVQEPPL-RNTQDSPQILEPSDVEEPSGTLLSSVNEQEIP 405

  Fly   345 GRDEDDDDEDEEEDTPMPLDLYQRPNVEPKSAAAATAAQQGGSNSLSGSSN 395
            .|.:...|..|   :|...|:....:..|..  ....::.|.|..|:|..:
Mouse   406 ARIQLCQDSPE---SPRLQDILLSASHSPDH--PMVKSEFGSSPMLTGKES 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mamoNP_572932.2 BTB 21..118 CDD:279045 31/94 (33%)
BTB 32..118 CDD:197585 29/88 (33%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Btbd18NP_001138572.1 BTB_POZ_BTBD18 20..138 CDD:349602 31/109 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..176 4/25 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..350 34/172 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..394 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..637
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 699..723
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.