DRSC/TRiP Functional Genomics Resources

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Protein Alignment AMPdeam and Ampd1

DIOPT Version :9

Sequence 1:NP_001285233.1 Gene:AMPdeam / 32352 FlyBaseID:FBgn0052626 Length:798 Species:Drosophila melanogaster
Sequence 2:XP_038957689.1 Gene:Ampd1 / 25028 RGDID:2109 Length:772 Species:Rattus norvegicus


Alignment Length:718 Identity:363/718 - (50%)
Similarity:484/718 - (67%) Gaps:36/718 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NEISAPYEVPQF-PIEQIEKKLQI--------------QRHLNEKQATG---PRPVATAAVLATN 134
            :||| |::|.:. ||...|.:..|              :|....::...   |:...::..|:..
  Rat    61 HEIS-PFDVDEICPISLREMQAHIFHMENLSMSMDGRRKRRFQGRKTVNLSIPQSETSSTKLSHI 124

  Fly   135 RESSSSTEGRESAVTMERNDADINFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSD 199
            .|..||:...||..         :||||.|:|:..|||.:||.|.....|..||.:|..||..|.
  Rat   125 EEFISSSPTYESVP---------DFQRVQITGDYASGVTVEDFEVVCKGLYRALCIREKYMQKSF 180

  Fly   200 QSFPSTTARFLKTVKLKDRINNLPVKEVSDVHLRHSPMKITNPWNVE-FPNDEDFKIKPLNGVFH 263
            |.||.|.:::|:.:   |....:.::....| ....|.|..:|:..| .|.:..:.:|...||.:
  Rat   181 QRFPKTPSKYLRNI---DGEALVAIESFYPV-FTPPPKKGEDPFRREDLPANLGYHLKMKGGVIY 241

  Fly   264 IYENDDESSEIK---YEYPDMSQFVNDMQVMCNMIADGPLKSFCYRRLCYLSSKYQMHVLLNELR 325
            ||.::..:|..:   |.||::..|::||..:..:||.||:|::.:|||.:||||:|:|.:|||:.
  Rat   242 IYPDEAAASRDEPKPYPYPNLDDFLDDMNFLLALIAQGPVKTYTHRRLKFLSSKFQVHQMLNEMD 306

  Fly   326 ELAAQKAVPHRDFYNTRKVDTHIHAASCMNQKHLLRFIKKTLKNNANEVVTVTNGQQMTLAQVFQ 390
            ||...|..|||||||.||||||||||:|||||||||||||:...:|:.||..|..:.:||.::|.
  Rat   307 ELKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYHIDADRVVYSTKEKNLTLKELFA 371

  Fly   391 SMNLTTYDLTVDMLDVHADRNTFHRFDKFNSKYNPIGESRLREVFLKTDNYLNGKYFAQIIKEVA 455
            .:|:..||||||.|||||.|.||.||||||.||||:|.|.||:::||||||:||:|||.|||||.
  Rat   372 QLNMHPYDLTVDSLDVHAGRQTFQRFDKFNDKYNPVGASELRDLYLKTDNYINGEYFATIIKEVG 436

  Fly   456 FDLEESKYQNAELRLSIYGKSPDEWYKLAKWAIDNDVYSSNIRWLIQIPRLFDIFKSNKMMKSFQ 520
            .||.::|||:||.||||||:|||||.||:.|.:.|.:|..|:.|:||:||::|:|:|...:..|.
  Rat   437 ADLVDAKYQHAEPRLSIYGRSPDEWSKLSSWFVGNRIYCPNMTWMIQVPRIYDVFRSKNFLPHFG 501

  Fly   521 EILNNIFLPLFEATARPSKHPELHRFLQYVIGFDSVDDESKPENPLFDNDVPRPEEWTYEENPPY 585
            ::|.|||||:||||..|..||:|..||:::.||||||||||....:|.:..|:|||||.|.||.|
  Rat   502 KMLENIFLPVFEATINPQTHPDLSVFLKHITGFDSVDDESKHSGHMFSSKSPKPEEWTMENNPSY 566

  Fly   586 AYYIYYMYANMTVLNKFRQSRNMNTFVLRPHCGEAGPVQHLVCGFLMAENISHGLLLRKVPVLQY 650
            .||.||||||:.|||..|:.|.||||:.||||||||.:.||:..|::|:||||||.|:|.|||||
  Rat   567 TYYAYYMYANIMVLNCLRKERGMNTFLFRPHCGEAGALTHLMTAFMIADNISHGLNLKKSPVLQY 631

  Fly   651 LYYLTQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLIISLSTDDPLQFHFTKEPLMEEYSIAAQV 715
            |::|.||.|||||||||||||.|.:||..::|.:||:||||||||:|||||||||||||:|||||
  Rat   632 LFFLAQIPIAMSPLSNNSLFLEYAKNPFLDFLQKGLMISLSTDDPMQFHFTKEPLMEEYAIAAQV 696

  Fly   716 WKLSSCDMCELARNSVMMSGFPHAIKQQWLGPIYYEDGIMGNDITRTNVPEIRVAYRYETLLDEL 780
            :|||:|||||:|||||:..|..|..|.::||..|.|:|.:||||.||||.:||:||||||...||
  Rat   697 FKLSTCDMCEVARNSVLQCGISHEEKAKFLGNNYLEEGPVGNDIRRTNVAQIRMAYRYETWCYEL 761

  Fly   781 SNI 783
            :.|
  Rat   762 NLI 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPdeamNP_001285233.1 PLN03055 248..784 CDD:178613 316/539 (59%)
AMPD 284..780 CDD:238644 303/495 (61%)
Ampd1XP_038957689.1 AMPD 265..761 CDD:238644 303/495 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11272
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D115023at33208
OrthoFinder 1 1.000 - - FOG0001065
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100681
Panther 1 1.100 - - O PTHR11359
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X640
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.780

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