DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPdeam and Ampd1

DIOPT Version :9

Sequence 1:NP_001285233.1 Gene:AMPdeam / 32352 FlyBaseID:FBgn0052626 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001028475.2 Gene:Ampd1 / 229665 MGIID:88015 Length:745 Species:Mus musculus


Alignment Length:722 Identity:369/722 - (51%)
Similarity:482/722 - (66%) Gaps:46/722 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 NEISAPYEVPQF-PIEQIEKKLQIQRHLNEKQATG----------------PRPVATAAVLATNR 135
            :||| |::|.:. ||...|.:..| .|:......|                |:...::..|:...
Mouse    36 HEIS-PFDVDEICPISLHEMQAHI-FHMENLSMDGRRKRRFQGRKTVNLSIPQSETSSTKLSHIE 98

  Fly   136 ESSSSTEGRESAVTMERNDADINFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSDQ 200
            |..||:...||..         :||||.|:|:..|||.:||.|.....|..||.:|..||..|.|
Mouse    99 EFISSSPTYESVP---------DFQRVQITGDYASGVTVEDFEVVCKGLYRALCIREKYMQKSFQ 154

  Fly   201 SFPSTTARFLKTVKLKDRINN---LPVKEVSDVHLRHSPMKITNPWNVE-FPNDEDFKIKPLNGV 261
            .||.|.:::|:.:..:..:.|   .||       ....|.|..:|:..| .|.:..:.:|...||
Mouse   155 RFPKTPSKYLRNIDGEALVGNESFYPV-------FTPPPKKGEDPFRTEDLPANLGYHLKMKAGV 212

  Fly   262 FHIY-----ENDDESSEIKYEYPDMSQFVNDMQVMCNMIADGPLKSFCYRRLCYLSSKYQMHVLL 321
            .:||     .|.||..  .|.||::..|::||..:..:||.||:|::.:|||.:||||:|:|.:|
Mouse   213 IYIYPDEAAANRDEPK--PYPYPNLDDFLDDMNFLLALIAQGPVKTYAHRRLKFLSSKFQVHQML 275

  Fly   322 NELRELAAQKAVPHRDFYNTRKVDTHIHAASCMNQKHLLRFIKKTLKNNANEVVTVTNGQQMTLA 386
            ||:.||...|..|||||||.||||||||||:|||||||||||||:...:|:.||..|..:.:||.
Mouse   276 NEMDELKELKNNPHRDFYNCRKVDTHIHAAACMNQKHLLRFIKKSYHIDADRVVYSTKEKSLTLK 340

  Fly   387 QVFQSMNLTTYDLTVDMLDVHADRNTFHRFDKFNSKYNPIGESRLREVFLKTDNYLNGKYFAQII 451
            ::|..:|:..||||||.|||||.|.||.||||||.||||:|.|.||:::||||||:||:|||.||
Mouse   341 ELFAKLNMHPYDLTVDSLDVHAGRQTFQRFDKFNDKYNPVGASELRDLYLKTDNYINGEYFATII 405

  Fly   452 KEVAFDLEESKYQNAELRLSIYGKSPDEWYKLAKWAIDNDVYSSNIRWLIQIPRLFDIFKSNKMM 516
            |||..||.|:|||:||.||||||:|||||.||:.|.:.|.:|..|:.|:||:||::|:|:|...:
Mouse   406 KEVGADLVEAKYQHAEPRLSIYGRSPDEWNKLSSWFVCNRIYCPNMTWMIQVPRIYDVFRSKNFL 470

  Fly   517 KSFQEILNNIFLPLFEATARPSKHPELHRFLQYVIGFDSVDDESKPENPLFDNDVPRPEEWTYEE 581
            ..|.::|.|||||:||||..|..||:|..||:::.||||||||||....:|.:..|:|||||.|.
Mouse   471 PHFGKMLENIFLPVFEATINPQAHPDLSVFLKHITGFDSVDDESKHSGHMFSSKSPKPEEWTMEN 535

  Fly   582 NPPYAYYIYYMYANMTVLNKFRQSRNMNTFVLRPHCGEAGPVQHLVCGFLMAENISHGLLLRKVP 646
            ||.|.||.||||||:||||..|:.|.||||:.||||||||.:.||:..|::|:||||||.|:|.|
Mouse   536 NPSYTYYAYYMYANITVLNSLRKERGMNTFLFRPHCGEAGALTHLMTAFMIADNISHGLNLKKSP 600

  Fly   647 VLQYLYYLTQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLIISLSTDDPLQFHFTKEPLMEEYSI 711
            |||||::|.||.|||||||||||||.|.:||..::|.:||:||||||||:|||||||||||||:|
Mouse   601 VLQYLFFLAQIPIAMSPLSNNSLFLEYAKNPFLDFLQKGLMISLSTDDPMQFHFTKEPLMEEYAI 665

  Fly   712 AAQVWKLSSCDMCELARNSVMMSGFPHAIKQQWLGPIYYEDGIMGNDITRTNVPEIRVAYRYETL 776
            ||||:|||:|||||:|||||:..|..|..|.::||..|.|:|.:||||.||||.:||:||||||.
Mouse   666 AAQVFKLSTCDMCEVARNSVLQCGISHEEKAKFLGNNYLEEGPVGNDIRRTNVAQIRMAYRYETW 730

  Fly   777 LDELSNI 783
            ..||:.|
Mouse   731 CYELNLI 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPdeamNP_001285233.1 PLN03055 248..784 CDD:178613 320/541 (59%)
AMPD 284..780 CDD:238644 305/495 (62%)
Ampd1NP_001028475.2 PLN03055 129..740 CDD:178613 342/618 (55%)
AMPD 238..734 CDD:238644 305/495 (62%)
Substrate binding. /evidence=ECO:0000250 372..377 3/4 (75%)
Substrate binding. /evidence=ECO:0000250 648..651 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11492
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001065
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100681
Panther 1 1.100 - - O PTHR11359
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X640
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.770

Return to query results.
Submit another query.