DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AMPdeam and ampd2a

DIOPT Version :9

Sequence 1:NP_001285233.1 Gene:AMPdeam / 32352 FlyBaseID:FBgn0052626 Length:798 Species:Drosophila melanogaster
Sequence 2:XP_002666175.3 Gene:ampd2a / 100330772 ZFINID:ZDB-GENE-091204-4 Length:823 Species:Danio rerio


Alignment Length:812 Identity:453/812 - (55%)
Similarity:579/812 - (71%) Gaps:61/812 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 MSHAATNAAGPLGSKASGK--------SLNACTSM---------SMPQKPSSLRATCDLADSPVD 77
            ||..:.:.|.|.|...:||        |.:.|.|:         |:|..|.|.:      ..|:|
Zfish     1 MSEGSASPAQPRGKAKTGKRGSFHSRTSPDLCGSVDSRPLMSQRSLPVTPVSHK------HLPID 59

  Fly    78 EKAEAD---VEVTNEI-----------SAPYEVP-QFPIEQI-EKKLQIQRHLNEKQATGPRPVA 126
            .:...|   .|:..|:           .||||.| :.||||: ||:.:::|.:::.....|..:.
Zfish    60 LRTSMDGKYKEIAEELLARSLTDSDMRCAPYEFPEESPIEQLEEKRHRLERQISQDVKLEPEILV 124

  Fly   127 TAAVLATNRESSSSTE----GRESAVT---MERND-ADINFQRVSISGEDTSGVPLEDLERASTL 183
            .|.......:|::..|    .:|..|.   :||.. .:..|||||||||:..|||..||..|:..
Zfish   125 RAKQDFMKVDSTADLEYLKDSQEDTVDYPFIERETVTEREFQRVSISGEEKCGVPFTDLVDAAKC 189

  Fly   184 LIEALRLRSHYMAMSDQSFPSTTARFLKTV-------KLKDRINNLPVKEVSDVHLRHSPMKITN 241
            :::||.:|..||::|.|:|..||||.|:.:       .:.:.::..||.  |||.: |.|:..|:
Zfish   190 VVKALFIREKYMSLSLQNFSRTTARCLRELNERPLDTNIYEELHESPVD--SDVSV-HPPVSKTH 251

  Fly   242 PWNVE-FPNDEDFKIKPLNGVFHIYEND---DESSEIKYEYPDMSQFVNDMQVMCNMIADGPLKS 302
            |:..: .|:|..:....::||||:|...   |:|:|:...|||:.:::.||.||..:|.:||:||
Zfish   252 PYEEQNLPSDLGYSCAMVDGVFHVYTTQNPKDKSTELDLPYPDLQEYIADMNVMMALIINGPVKS 316

  Fly   303 FCYRRLCYLSSKYQMHVLLNELRELAAQKAVPHRDFYNTRKVDTHIHAASCMNQKHLLRFIKKTL 367
            ||||||.|||||:||||||||::||||||.||||||||.|||||||||:|||||||||||||:.:
Zfish   317 FCYRRLQYLSSKFQMHVLLNEMKELAAQKKVPHRDFYNIRKVDTHIHASSCMNQKHLLRFIKRAM 381

  Fly   368 KNNANEVVTVTNGQQMTLAQVFQSMNLTTYDLTVDMLDVHADRNTFHRFDKFNSKYNPIGESRLR 432
            |...:|:|.:.||:..||..||::||||.|||:||.||:|||||||||||||||||||||||.||
Zfish   382 KKYPDEIVHIENGRGQTLMDVFENMNLTAYDLSVDTLDMHADRNTFHRFDKFNSKYNPIGESILR 446

  Fly   433 EVFLKTDNYLNGKYFAQIIKEVAFDLEESKYQNAELRLSIYGKSPDEWYKLAKWAIDNDVYSSNI 497
            |:|:||||:::||||..|:|||..|||||||||||||||:||:|.|||.||||||:.:.|||.|:
Zfish   447 EIFIKTDNHIHGKYFGHIVKEVMSDLEESKYQNAELRLSVYGRSMDEWDKLAKWAVTHSVYSDNV 511

  Fly   498 RWLIQIPRLFDIFKSNKMMKSFQEILNNIFLPLFEATARPSKHPELHRFLQYVIGFDSVDDESKP 562
            |||:|||||||::::.|.:.:||::|.||||||||.|..||.||:||.|||:|:|||||||||||
Zfish   512 RWLVQIPRLFDVYRTKKQLSNFQQMLENIFLPLFEVTINPSSHPQLHLFLQHVVGFDSVDDESKP 576

  Fly   563 ENPLFDNDVPRPEEWTYEENPPYAYYIYYMYANMTVLNKFRQSRNMNTFVLRPHCGEAGPVQHLV 627
            |:.:|:.|.|.|..|..::||||:||:|||||||||||..|:.|..:|||||||||||||:.|||
Zfish   577 EHHIFNLDSPSPARWCDDDNPPYSYYLYYMYANMTVLNHLRRRRGFHTFVLRPHCGEAGPIHHLV 641

  Fly   628 CGFLMAENISHGLLLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLNYHRNPLPEYLARGLIISLST 692
            .||:::|||||||||||.|||||||||.|:||||||||||||||:||||||||||:|||::||||
Zfish   642 SGFMLSENISHGLLLRKAPVLQYLYYLAQVGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLST 706

  Fly   693 DDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVMMSGFPHAIKQQWLGPIYYEDGIMGN 757
            ||||||||||||||||||||.||||||||||||||||||:||||.|..|..||||.|.::|.:.|
Zfish   707 DDPLQFHFTKEPLMEEYSIATQVWKLSSCDMCELARNSVLMSGFSHKSKSHWLGPDYTKEGPISN 771

  Fly   758 DITRTNVPEIRVAYRYETLLDELSNIFKVNQT 789
            ||.|||||:|||||||||:.:||..|.:..:|
Zfish   772 DIRRTNVPDIRVAYRYETMCEELHLIIQAVRT 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AMPdeamNP_001285233.1 PLN03055 248..784 CDD:178613 375/538 (70%)
AMPD 284..780 CDD:238644 360/495 (73%)
ampd2aXP_002666175.3 PLN03055 245..797 CDD:178613 378/551 (69%)
AMPD 298..794 CDD:238644 360/495 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574391
Domainoid 1 1.000 659 1.000 Domainoid score I150
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 877 1.000 Inparanoid score I386
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D115023at33208
OrthoFinder 1 1.000 - - FOG0001065
OrthoInspector 1 1.000 - - otm26336
orthoMCL 1 0.900 - - OOG6_100681
Panther 1 1.100 - - O PTHR11359
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X640
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.900

Return to query results.
Submit another query.