DRSC/TRiP Functional Genomics Resources

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Protein Alignment jub and Ajuba

DIOPT Version :10

Sequence 1:NP_572930.3 Gene:jub / 32351 FlyBaseID:FBgn0030530 Length:728 Species:Drosophila melanogaster
Sequence 2:NP_445955.1 Gene:Ajuba / 85265 RGDID:620407 Length:548 Species:Rattus norvegicus


Alignment Length:528 Identity:201/528 - (38%)
Similarity:264/528 - (50%) Gaps:108/528 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   209 GGPPPPSGRSAALGPTGDLE-EHAAPIYENIIPHSGQRAQPQASPATATMYQEMQPTS------- 265
            |||||.......|....|.. |..||           ...|::|.|:::.....:|:|       
  Rat   101 GGPPPTRALPLPLSSPPDFRLETTAP-----------ALSPRSSFASSSASDASKPSSPRGSLLL 154

  Fly   266 NSSGSSSTAGLDLNALLASPMHQRSISSNTASSSSLGSPTQRYRNLSLPSHLSPVPTAQSVAKLQ 330
            :.:|:|...|       :.|      .||..|..|:|. .||        |.||:|....:..|.
  Rat   155 DGAGASGAGG-------SRP------CSNRTSGISMGY-DQR--------HGSPLPAGPCLFGLP 197

  Fly   331 QHTPVKSPGGAINVSVNPNYIEDINSSDYVCMTANLHRNT----------------AAGLATGRA 379
            ..|   :|.|..:..|...|.|...:.|.:|    .||..                :.|..||..
  Rat   198 LTT---APSGYSSGGVPSAYPELHAALDRLC----AHRPVGFGCQESRHSYPPALGSPGALTGAV 255

  Fly   380 AATGAPAQRTVQEPPIITSSLAMGMATAAPPTTSNAPTSAAAAPAAPTSTASLRATPIAMTAPLA 444
            ..|..|.:|...:|              ...:.:.....||.|......||.||         |.
  Rat   256 VGTAGPLERRGTQP--------------GRHSVTGYGDCAAGARYQDELTALLR---------LT 297

  Fly   445 VATSPTPSQGSTAVNAALKPRRGLTKNLLPYSVTPPRPAGPTEAQRKIEELTRQLEEEIEQSEEH 509
            |||....: |:......::| .||.::  |.|..|       ||.|          ..|.:.|..
  Rat   298 VATGGREA-GARGEPLGIEP-SGLEES--PGSFVP-------EASR----------SRIREPEAR 341

  Fly   510 GEYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYMYSGF 574
            .:|||.|..|.:.:.|...||||:.:||||.||:||||||.||.||||:|:|.|||||||::|||
  Rat   342 EDYFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLFSGF 406

  Fly   575 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKIYCVNDYHRMFAP 639
            |:.||||.:|||||:|.||||||||||||||||.|||:||||||||||..:::|||.|||:.:||
  Rat   407 QEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGVPFTVDFSNQVYCVTDYHKNYAP 471

  Fly   640 KCASCGKGITPVEGTDETVRVVSMDKDFHVDCYICEECGMQLTDEPDKRCYPLDGRLLCRGCHLQ 704
            |||:||:.|.|.||.::.|||:|||:|:|.:||.||:|.|||:||....|:||||.|||.|||:|
  Rat   472 KCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHGCHMQ 536

  Fly   705 RLALQSSP 712
            ||:.:..|
  Rat   537 RLSARQPP 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jubNP_572930.3 LIM1_Ajuba_like 516..569 CDD:188738 32/52 (62%)
LIM2_Ajuba_like 581..633 CDD:188741 39/51 (76%)
LIM3_Ajuba_like 641..702 CDD:188822 35/60 (58%)
AjubaNP_445955.1 PreLIM 1..345 71/327 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..182 24/105 (23%)
Nuclear localization signal. /evidence=ECO:0000255 290..298 5/16 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..333 9/45 (20%)
LIM1_Ajuba_like 348..401 CDD:188738 32/52 (62%)
LIM2_Ajuba_like 413..465 CDD:188741 39/51 (76%)
LIM3_Ajuba_like 473..534 CDD:188822 35/60 (58%)

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