Protein Alignment jub and limd1b

DIOPT Version :10

• Sequence 1: NP_572930.3
• Gene: jub / 32351
• FlyBaseID: FBgn0030530
• Length: 728
• Species: Drosophila melanogaster
• Sequence 2: XP_021323920.1
• Gene: limd1b / 798800
• ZFINID: ZDB-GENE-060810-174
• Length: 173
• Species: Danio rerio
• Alignment Length: 166
• Identity: 87/166 - (52%)
• Similarity: 117/166 - (70%)
• Gaps: 0/166 - (0%)

  Fly   507 EEHGEYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYMY 571
            :.|....|.|..|...|..:.|||||||.:||..||.||:||:.|:||.||:..|:|:|||||:|
Zfish     2 DTHTLSLGWCVKCSGGVYSSDQACQAMGRVYHDRCFTCCTCGQKLKGKPFYDFSGQVFCEEDYLY 66

  Fly   572 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKIYCVNDYHRM 636
            |..:..||.|:.||:||.:|:|||:|||:|..||||.||||.|:|..|:||..:|||||.||||.
Zfish    67 SSVKHFAEVCSSCGYLITDMVLQALGKSFHRECFRCVVCNETLEGQQFSVDAQNKIYCVKDYHRF 131

  Fly   637 FAPKCASCGKGITPVEGTDETVRVVSMDKDFHVDCY 672
            .|..||.|.:.|.|:||::|::||::|.:.:||.||
Zfish   132 LAQTCAVCEQLILPIEGSNESMRVLTMGRSYHVACY 167

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jub	NP_572930.3	LIM1_Ajuba_like	516..569	CDD:188738	28/52 (54%)
		LIM2_Ajuba_like	581..633	CDD:188741	31/51 (61%)
		LIM3_Ajuba_like	641..702	CDD:188822	15/32 (47%)
limd1b	XP_021323920.1	LIM	11..64	CDD:413332	28/52 (54%)
		LIM	76..128	CDD:413332	31/51 (61%)
		LIM	136..>167	CDD:413332	13/30 (43%)